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fix doublons export

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This commit is contained in:
Colas Geier 2025-12-03 17:41:49 +01:00
parent 04554a071a
commit 15d555f3aa
1 changed files with 11 additions and 7 deletions
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18
5_GEONATURE/EXPORT/flore_export_sinp_with_metadata.py
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@ -1,7 +1,7 @@
from pycen import con_gn from pycen import con_gn
sql = ''' sql = '''
DROP VIEW IF EXISTS gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg; DROP VIEW IF EXISTS gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg CASCADE;
CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
WITH af_actors AS ( WITH af_actors AS (
@ -10,27 +10,31 @@ CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
LEFT JOIN utilisateurs.bib_organismes borg ON cafa.id_organism = borg.id_organisme LEFT JOIN utilisateurs.bib_organismes borg ON cafa.id_organism = borg.id_organisme
WHERE borg.uuid_organisme = '5a433bd0-2070-25d9-e053-2614a8c026f8'::uuid WHERE borg.uuid_organisme = '5a433bd0-2070-25d9-e053-2614a8c026f8'::uuid
), af AS ( ), af AS (
SELECT taf.id_acquisition_framework SELECT taf.id_acquisition_framework, unique_acquisition_framework_id
FROM gn_meta.t_acquisition_frameworks taf FROM gn_meta.t_acquisition_frameworks taf
JOIN af_actors ON af_actors.id_acquisition_framework = taf.id_acquisition_framework JOIN af_actors ON af_actors.id_acquisition_framework = taf.id_acquisition_framework
GROUP BY taf.id_acquisition_framework GROUP BY taf.id_acquisition_framework
), ds AS ( ), ds AS (
SELECT tds.id_dataset, SELECT tds.id_dataset, tds.unique_dataset_id,
tds.dataset_name AS nom_jdd, tds.dataset_name AS nom_jdd,
tds.id_acquisition_framework tds.id_acquisition_framework
FROM gn_meta.t_datasets tds FROM gn_meta.t_datasets tds
GROUP BY tds.id_dataset, tds.dataset_name GROUP BY tds.id_dataset, tds.dataset_name
), geo AS ( ), geo AS (
SELECT "left"(geo_1.area_code::text, 2) AS departement, SELECT "left"(geo_1.area_code::text, 2) AS departement,
geo_1.area_code AS commune, json_agg(geo_1.area_code) AS commune,
s_1.id_synthese, s_1.id_synthese,
st_transform(s_1.the_geom_local, 4326) AS st_transform st_transform(s_1.the_geom_local, 4326) AS st_transform
FROM ref_geo.l_areas geo_1 FROM ref_geo.l_areas geo_1
JOIN gn_synthese.synthese s_1 ON st_intersects(s_1.the_geom_4326, st_transform(geo_1.geom, 4326)) JOIN gn_synthese.cor_area_synthese USING (id_area)
JOIN gn_synthese.synthese s_1 USING (id_synthese)
WHERE geo_1.id_type = 25 WHERE geo_1.id_type = 25
GROUP BY 1,3,4
) )
SELECT SELECT
af.unique_acquisition_framework_id id_sinp_ca,
ds.nom_jdd AS nom_jdd, ds.nom_jdd AS nom_jdd,
ds.unique_dataset_id id_sinp_jdd,
s.unique_id_sinp_grp AS id_sinp_releve, s.unique_id_sinp_grp AS id_sinp_releve,
occ.id_releve_occtax AS identifiant_releve, occ.id_releve_occtax AS identifiant_releve,
NULL::text AS code_perso_releve, NULL::text AS code_perso_releve,
@ -169,13 +173,13 @@ CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
LEFT JOIN ref_nomenclatures.t_nomenclatures n19 ON s.id_nomenclature_determination_method = n19.id_nomenclature LEFT JOIN ref_nomenclatures.t_nomenclatures n19 ON s.id_nomenclature_determination_method = n19.id_nomenclature
LEFT JOIN ref_nomenclatures.t_nomenclatures n20 ON s.id_nomenclature_valid_status = n20.id_nomenclature LEFT JOIN ref_nomenclatures.t_nomenclatures n20 ON s.id_nomenclature_valid_status = n20.id_nomenclature
LEFT JOIN taxonomie.taxref n21 ON s.cd_nom = n21.cd_nom LEFT JOIN taxonomie.taxref n21 ON s.cd_nom = n21.cd_nom
JOIN gn_synthese.cor_area_synthese cas ON cas.id_synthese = s.id_synthese --JOIN gn_synthese.cor_area_synthese cas ON cas.id_synthese = s.id_synthese
-- ADD CEN_38 -- ADD CEN_38
JOIN gn_synthese.t_sources ts ON ts.id_source = s.id_source JOIN gn_synthese.t_sources ts ON ts.id_source = s.id_source
WHERE n21.regne::text = 'Plantae'::text WHERE n21.regne::text = 'Plantae'::text
-- exclision CA ([SICEN] Données anciennes,[TEST] : migration sicen,[SICEN] Hors Etude) -- exclision CA ([SICEN] Données anciennes,[TEST] : migration sicen,[SICEN] Hors Etude)
AND ds.id_acquisition_framework NOT IN (53,65,66,1,2,6) AND ds.id_acquisition_framework NOT IN (53,66,1,2,6)
-- exclision JDD `Observations opportunistes du CEN Isère importé depuis Faune Isère` -- exclision JDD `Observations opportunistes du CEN Isère importé depuis Faune Isère`
AND ds.id_dataset NOT IN (185,377,236) AND ds.id_dataset NOT IN (185,377,236)
-- exclision CA (`Gestion de l'Espace Naturel Sensible du Méandre des Oves`, `Gestion de la Réserve Naturelle Nationale de l'Ile de la Platière`, `Gestion des Natura 2000 FR 8201749 « Milieux alluviaux et aquatiques de l’Île de la Platière » et FR 8212012 « Île de la Platière »`, `RNN Platière` -- exclision CA (`Gestion de l'Espace Naturel Sensible du Méandre des Oves`, `Gestion de la Réserve Naturelle Nationale de l'Ile de la Platière`, `Gestion des Natura 2000 FR 8201749 « Milieux alluviaux et aquatiques de l’Île de la Platière » et FR 8212012 « Île de la Platière »`, `RNN Platière`