15_POLICE/v_infraction_rnn.py

@@ -1,29 +0,0 @@
-#!/usr/bin/env python3
-# -*- coding: UTF-8 -*-
-
-sql = '''
-SELECT 
-	split_part(b.data_id,':',2)::uuid data_id,
-    "submitterName" digitiser,
-    autre_catego_sensi,
-    autre_type_sanct,
-    catego_controle,
-    catego_sensibil,
-    "Commentaire_remarque_nombre_de_tentes",
-    "Conformit_du_contr_le",
-    day "date",
-    "heure",
-    infract_nb,
-    nat_operation,
-    nature_pers,
-    nb_pers_control,
-    nb_pers_sensibil,
-    nb_verb,
-    nom_agent,
-    type_sanct,
-    "submissionDate" date_saisie, 
-    "updatedAt" date_maj,
-	st_force2d(st_geomfromgeojson(replace(COALESCE(geom,point_carte),'\','')))::geometry(geometry, 4326) AS geom
-
-FROM police.infraction_rnn_submissions_data AS b
-'''

5_GEONATURE/EXPORT/flore_export_sinp_with_metadata 2.py

@@ -1,177 +0,0 @@
-from pycen import con_gn
-
-sql = '''
-DROP VIEW IF EXISTS gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg_bis;
-
-CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg_bis AS
- WITH af_actors AS (
-         SELECT cafa.id_acquisition_framework
-           FROM gn_meta.cor_acquisition_framework_actor cafa
-             LEFT JOIN utilisateurs.bib_organismes borg ON cafa.id_organism = borg.id_organisme
-          WHERE borg.uuid_organisme = '5a433bd0-2070-25d9-e053-2614a8c026f8'::uuid 
-        ), af AS (
-         SELECT taf.id_acquisition_framework
-           FROM gn_meta.t_acquisition_frameworks taf
-             JOIN af_actors ON af_actors.id_acquisition_framework = taf.id_acquisition_framework
-          GROUP BY taf.id_acquisition_framework
-        ), ds AS (
-         SELECT tds.id_dataset,
-            tds.dataset_name AS nom_jdd,
-            tds.id_acquisition_framework
-           FROM gn_meta.t_datasets tds
-          GROUP BY tds.id_dataset, tds.dataset_name
-        ), geo AS (
-         SELECT "left"(geo_1.area_code::text, 2) AS departement,
-            geo_1.area_code AS commune,
-            s_1.id_synthese,
-            st_transform(s_1.the_geom_local, 4326) AS st_transform
-           FROM ref_geo.l_areas geo_1
-             JOIN gn_synthese.synthese s_1 ON st_intersects(s_1.the_geom_4326, st_transform(geo_1.geom, 4326))
-          WHERE geo_1.id_type = 25
-        )
- SELECT 
-    ds.nom_jdd AS nom_jdd,
-    s.unique_id_sinp_grp AS id_sinp_releve,
-    occ.id_releve_occtax AS identifiant_releve,
-    NULL::text AS code_perso_releve,
-    s.unique_id_sinp AS id_sinp_observation,
-    s.entity_source_pk_value AS identifiant_observation,
-    geo.departement,
-    geo.commune,
-    NULL::text AS lieu_dit,
-    CASE
-        WHEN "position"(sp.srtext::text, 'GEOGCS'::text) = 1 THEN "substring"(replace(sp.srtext::text, 'GEOGCS["'::text, ''::text), 1, "position"(replace(sp.srtext::text, 'GEOGCS["'::text, ''::text), '",'::text) - 1)
-        WHEN "position"(sp.srtext::text, 'PROJCS'::text) = 1 THEN "substring"(replace(sp.srtext::text, 'PROJCS["'::text, ''::text), 1, "position"(replace(sp.srtext::text, 'PROJCS["'::text, ''::text), '",'::text) - 1)
-        WHEN "position"(sp.srtext::text, 'GEOCCS'::text) = 1 THEN "substring"(replace(sp.srtext::text, 'GEOCCS["'::text, ''::text), 1, "position"(replace(sp.srtext::text, 'GEOCCS["'::text, ''::text), '",'::text) - 1)
-        WHEN "position"(sp.srtext::text, 'COMPD_CS'::text) = 1 THEN "substring"(replace(sp.srtext::text, 'COMPD_CS["'::text, ''::text), 1, "position"(replace(sp.srtext::text, 'COMPD_CS["'::text, ''::text), '",'::text) - 1)
-        ELSE 'Non défini'::text
-    END AS sys_coord,
-    st_srid(s.the_geom_4326) AS "SRID",
-    st_astext(s.the_geom_4326) AS localisation_wkt,
-    st_x(st_centroid(s.the_geom_4326)) AS coord_x,
-    st_y(st_centroid(s.the_geom_4326)) AS coord_y,
-    s."precision" AS precision,
-    NULL::text AS nature_objet,
-    s.altitude_min AS alti_min,
-    s.altitude_max AS alti_max,
-    NULL::text AS pente,
-    NULL::text AS exposition,
-    NULL::text AS comm_geol,
-    NULL::text AS milieu,
-    s.observers AS observateurs,
-    s.date_min AS date_debut,
-    s.date_max AS date_fin,
-    NULL::text AS comm_context,
-    n2.mnemonique AS type_regroupement,
-    s.grp_method AS meth_regroupement,
-    NULL::text AS surface,
-    (s."additional_data"::json#>>'{strate_flore}') || 
-    ref_nomenclatures.get_nomenclature_label((s."additional_data"::json#>>'{id_nomenclature_strate_flore}')::int)
-    AS strate_vegetation,
-    (s."additional_data"::json#>>'{heigth_herbace}')::text || (s."additional_data"::json#>>'{heigth_arbust}')::text
-        || (s."additional_data"::json#>>'{heigth_arbore}')::text || (s."additional_data"::json#>>'{heigth_ssarbust}')::text
-    AS hauteur_strate,
-    (s."additional_data"::json#>>'{rcvmt_herbace}')::text || (s."additional_data"::json#>>'{rcvmt_arbust}')::text
-        || (s."additional_data"::json#>>'{rcvmt_arbore}')::text || (s."additional_data"::json#>>'{rcvmt_ssarbust}')::text
-    AS recouvrement_strate,
-    s.cd_hab AS cdhab,
-    NULL::text AS cdhab_v,
-    NULL::text AS code_eur,
-    NULL::text AS code_eunis,
-    NULL::text AS code_cahab,
-    NULL::text AS code_cb,
-    NULL::text AS id_microhab,
-    n21.regne AS regne,
-    s.nom_cite AS nom_cite,
-    s.cd_nom as cd_nom,
-    (s."additional_data"::json#>>'{effectif_textuel}')::text ||
-    ref_nomenclatures.get_nomenclature_label((s."additional_data"::json#>>'{id_nomenclature_braunblanq_abdom}')::int)::text 
-    AS abondance,
-    NULL::text AS sociabilite,
-    n11.mnemonique AS sexe,
-    n7.mnemonique AS naturalite,
-    NULL::text AS comm_description,
-    n15.mnemonique AS statut_observation,
-    n12.mnemonique AS objet_denombrement,
-    n13.mnemonique AS type_denombrement,
-    s.count_min AS nombre_min,
-    s.count_max AS nombre_max,
-    n17.label_default AS statut_source,
-    NULL::text AS reference_biblio,
-    NULL::text AS page,
-    n8.mnemonique AS preuve_existence,
-    s.digital_proof AS preuve_numerique,
-    s.non_digital_proof AS preuve_non_numerique,
-    NULL::text AS nom_collection,
-    NULL::text AS ref_collection,
-    s.determiner AS determinateur,
-    NULL::text AS niv_val,
-    NULL::text AS niveau_diffusion,
-    n16.mnemonique AS floutage_dee,
-    NULL::text AS methode_observation,
-    CASE WHEN ts.name_source like 'MONITORING_%%'
-            THEN split_part(ts.name_source,'_',2)
-        ELSE 'RELEVE FLORE'::text 
-    END AS protocole,
-    n6.mnemonique AS etat_biologique,
-    n5.mnemonique AS statut_biologique,
-    n10.mnemonique AS stade_vie,
-    n19.mnemonique AS methode_determination,
-    n3.mnemonique AS comportement,
-    s.additional_data - '{effectif_textuel,strate_flore,code_atlas,id_nomenclature_braunblanq_abdom,id_nomenclature_strate_flore}'::text[] AS donnees_additionnelles
-   FROM gn_synthese.synthese s
-     JOIN ds ON ds.id_dataset = s.id_dataset
-     JOIN af ON ds.id_acquisition_framework = af.id_acquisition_framework
-     JOIN geo ON s.id_synthese = geo.id_synthese
-     JOIN spatial_ref_sys sp ON st_srid(s.the_geom_4326) = sp.auth_srid
-     LEFT JOIN ref_habitats.habref h ON h.cd_hab = s.cd_hab
-     LEFT JOIN pr_occtax.t_releves_occtax occ ON occ.unique_id_sinp_grp = s.unique_id_sinp_grp
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n1 ON s.id_nomenclature_geo_object_nature = n1.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n2 ON s.id_nomenclature_grp_typ = n2.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n3 ON s.id_nomenclature_behaviour = n3.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n4 ON s.id_nomenclature_obs_technique = n4.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n5 ON s.id_nomenclature_bio_status = n5.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n6 ON s.id_nomenclature_bio_condition = n6.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n7 ON s.id_nomenclature_naturalness = n7.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n8 ON s.id_nomenclature_exist_proof = n8.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n9 ON s.id_nomenclature_diffusion_level = n9.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n10 ON s.id_nomenclature_life_stage = n10.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n11 ON s.id_nomenclature_sex = n11.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n12 ON s.id_nomenclature_obj_count = n12.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n13 ON s.id_nomenclature_type_count = n13.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n14 ON s.id_nomenclature_sensitivity = n14.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n15 ON s.id_nomenclature_observation_status = n15.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n16 ON s.id_nomenclature_blurring = n16.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n17 ON s.id_nomenclature_source_status = n17.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n18 ON s.id_nomenclature_info_geo_type = n18.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n19 ON s.id_nomenclature_determination_method = n19.id_nomenclature
-     LEFT JOIN ref_nomenclatures.t_nomenclatures n20 ON s.id_nomenclature_valid_status = n20.id_nomenclature
-     LEFT JOIN taxonomie.taxref n21 ON s.cd_nom = n21.cd_nom
-     JOIN gn_synthese.cor_area_synthese cas ON cas.id_synthese = s.id_synthese
-
-    -- ADD CEN_38
-    JOIN gn_synthese.t_sources ts ON ts.id_source = s.id_source
-  WHERE n21.regne::text = 'Plantae'::text 
-    -- exclision CA ([SICEN] Données anciennes,[TEST] : migration sicen,[SICEN] Hors Etude)
-    AND ds.id_acquisition_framework NOT IN (53,65,66,1,2,6)
-    -- exclision JDD `Observations opportunistes du CEN Isère importé depuis Faune Isère`
-    AND ds.id_dataset NOT IN (185,377,236)
-    -- exclision CA (`Gestion de l'Espace Naturel Sensible du Méandre des Oves`, `Gestion de la Réserve Naturelle Nationale de l'Ile de la Platière`, `Gestion des Natura 2000 FR 8201749 « Milieux alluviaux et aquatiques de l’Île de la Platière » et FR 8212012 « Île de la Platière »`, `RNN Platière`
-    --AND (ts.id_module = 7 AND ds.id_acquisition_framework IN (7,38,39,42,44,45,46,48,55,57,58,60) 
-    AND (
-        unaccent(observers) LIKE ANY (array['%%Conservatoire d%%Espaces Naturels Isere%%', '%%Conservatoire d%%Espaces Naturels d%%Isere%%', '%%CEN Isere%%', '%%Association des Amis de l%%Ile de la Platiere%%']) 
-        OR observers NOT LIKE '%%(%%)%%'
-    )
-    AND unaccent(observers) NOT LIKE ALL(array[
-        '%%Sympetrum%%','%%Departement%%','%%Rhone%%','%%Oxalis%%',
-        '%%LPO%%','%%GRPLS%%','%%Parvi%%','%%CD Isere%%','%%Personnel%%','%%Independant%%'
-        '%%DELOCHE Denis%%'
-        ])
-    AND observers NOT IN ('', 'Benoit Dodelin',', ')
-    -- statut_validation = 'Certain - très probable'
-    -- AND n20.cd_nomenclature = '1'
-ORDER BY s.id_synthese;
-'''
-
-with con_gn.begin() as cnx:
-    cnx.execute(sql)

5_GEONATURE/EXPORT/flore_export_sinp_with_metadata.py

@@ -46,7 +46,7 @@ CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
             WHEN "position"(sp.srtext::text, 'COMPD_CS'::text) = 1 THEN "substring"(replace(sp.srtext::text, 'COMPD_CS["'::text, ''::text), 1, "position"(replace(sp.srtext::text, 'COMPD_CS["'::text, ''::text), '",'::text) - 1)
             ELSE 'Non défini'::text
         END AS sys_coord,
-    st_srid(s.the_geom_4326) AS "SRID",
+    st_srid(s.the_geom_4326) AS srid,
     st_astext(s.the_geom_4326) AS localisation_wkt,
     st_x(st_centroid(s.the_geom_4326)) AS coord_x,
     st_y(st_centroid(s.the_geom_4326)) AS coord_y,
@@ -69,8 +69,7 @@ CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
         THEN (s."additional_data"::json#>>'{strate_flore}')::text
     WHEN s."additional_data"::json#>>'{id_nomenclature_strate_flore}' IS NOT NULL
         THEN ref_nomenclatures.get_nomenclature_label((s."additional_data"::json#>>'{id_nomenclature_strate_flore}')::int)::text 
-        ELSE NULL::text 
-    END AS strate_vegetation,
+    ELSE NULL::text END AS strate_vegetation,
     CASE WHEN ref_nomenclatures.get_nomenclature_label((s."additional_data"::json#>>'{id_nomenclature_strate_flore}')::int)::text = 'Strate herbacée'::text
         THEN (s."additional_data"::json#>>'{heigth_herbace}')::text
     WHEN ref_nomenclatures.get_nomenclature_label((s."additional_data"::json#>>'{id_nomenclature_strate_flore}')::int)::text = 'Strate arbustive'::text
@@ -79,8 +78,8 @@ CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
         THEN (s."additional_data"::json#>>'{heigth_arbore}')::text
     WHEN ref_nomenclatures.get_nomenclature_label((s."additional_data"::json#>>'{id_nomenclature_strate_flore}')::int)::text = 'Strate sous-arbustive'::text
         THEN (s."additional_data"::json#>>'{heigth_ssarbust}')::text
-        ELSE NULL::text 
-    END AS hauteur_strate,
+    ELSE NULL::text END
+    AS hauteur_strate,
     CASE WHEN s."additional_data"::json#>>'{id_nomenclature_strate_flore}' IS NOT NULL
         THEN CASE WHEN ref_nomenclatures.get_nomenclature_label((s."additional_data"::json#>>'{id_nomenclature_strate_flore}')::int)::text = 'Strate herbacée'::text
             THEN (s."additional_data"::json#>>'{rcvmt_herbace}')::text
@@ -91,8 +90,7 @@ CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
         WHEN ref_nomenclatures.get_nomenclature_label((s."additional_data"::json#>>'{id_nomenclature_strate_flore}')::int)::text = 'Strate sous-arbustive'::text
             THEN (s."additional_data"::json#>>'{rcvmt_ssarbust}')::text
         ELSE NULL::text END
-        ELSE NULL::text 
-    END AS recouvrement_strate,
+    ELSE NULL::text END AS recouvrement_strate,
     s.cd_hab AS cdhab,
     NULL::text AS cdhab_v,
     NULL::text AS code_eur,
@@ -107,8 +105,7 @@ CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
         THEN (s."additional_data"::json#>>'{effectif_textuel}')::text
     WHEN s."additional_data"::json#>>'{id_nomenclature_braunblanq_abdom}' IS NOT NULL
         THEN ref_nomenclatures.get_nomenclature_label((s."additional_data"::json#>>'{id_nomenclature_braunblanq_abdom}')::int)::text 
-        ELSE NULL::text
-    END AS abondance,
+    ELSE NULL::text END AS abondance,
     NULL::text AS sociabilite,
     n11.mnemonique AS sexe,
     n7.mnemonique AS naturalite,
@@ -133,14 +130,13 @@ CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
     NULL::text AS methode_observation,
     CASE WHEN ts.name_source like 'MONITORING_%%'
         THEN split_part(ts.name_source,'_',2)
-        ELSE 'RELEVE FLORE'::text 
-    END AS protocole,
+    ELSE 'RELEVE FLORE'::text END AS protocole,
     n6.mnemonique AS etat_biologique,
     n5.mnemonique AS statut_biologique,
     n10.mnemonique AS stade_vie,
     n19.mnemonique AS methode_determination,
     n3.mnemonique AS comportement,
-    s.additional_data - '{effectif_textuel,strate_flore,code_atlas,id_nomenclature_braunblanq_abdom,id_nomenclature_strate_flore}'::text[] AS donnees_additionnelles
+    s.additional_data - '{effectif_textuel,strate_flore,code_atlas,id_nomenclature_braunblanq_abdom,id_nomenclature_strate_flore}'::text[] AS additional_data
    FROM gn_synthese.synthese s
      JOIN ds ON ds.id_dataset = s.id_dataset
      JOIN af ON ds.id_acquisition_framework = af.id_acquisition_framework
@@ -151,21 +147,21 @@ CREATE VIEW gn_exports.v_synthese_sinp_with_metadata_flora_for_gn2pg AS
      LEFT JOIN ref_nomenclatures.t_nomenclatures n1 ON s.id_nomenclature_geo_object_nature = n1.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n2 ON s.id_nomenclature_grp_typ = n2.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n3 ON s.id_nomenclature_behaviour = n3.id_nomenclature
-    -- LEFT JOIN ref_nomenclatures.t_nomenclatures n4 ON s.id_nomenclature_obs_technique = n4.id_nomenclature
+     LEFT JOIN ref_nomenclatures.t_nomenclatures n4 ON s.id_nomenclature_obs_technique = n4.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n5 ON s.id_nomenclature_bio_status = n5.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n6 ON s.id_nomenclature_bio_condition = n6.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n7 ON s.id_nomenclature_naturalness = n7.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n8 ON s.id_nomenclature_exist_proof = n8.id_nomenclature
-    -- LEFT JOIN ref_nomenclatures.t_nomenclatures n9 ON s.id_nomenclature_diffusion_level = n9.id_nomenclature
+     LEFT JOIN ref_nomenclatures.t_nomenclatures n9 ON s.id_nomenclature_diffusion_level = n9.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n10 ON s.id_nomenclature_life_stage = n10.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n11 ON s.id_nomenclature_sex = n11.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n12 ON s.id_nomenclature_obj_count = n12.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n13 ON s.id_nomenclature_type_count = n13.id_nomenclature
-    -- LEFT JOIN ref_nomenclatures.t_nomenclatures n14 ON s.id_nomenclature_sensitivity = n14.id_nomenclature
+     LEFT JOIN ref_nomenclatures.t_nomenclatures n14 ON s.id_nomenclature_sensitivity = n14.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n15 ON s.id_nomenclature_observation_status = n15.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n16 ON s.id_nomenclature_blurring = n16.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n17 ON s.id_nomenclature_source_status = n17.id_nomenclature
-    -- LEFT JOIN ref_nomenclatures.t_nomenclatures n18 ON s.id_nomenclature_info_geo_type = n18.id_nomenclature
+     LEFT JOIN ref_nomenclatures.t_nomenclatures n18 ON s.id_nomenclature_info_geo_type = n18.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n19 ON s.id_nomenclature_determination_method = n19.id_nomenclature
      LEFT JOIN ref_nomenclatures.t_nomenclatures n20 ON s.id_nomenclature_valid_status = n20.id_nomenclature
      LEFT JOIN taxonomie.taxref n21 ON s.cd_nom = n21.cd_nom

5_GEONATURE/EXPORT/v_synthese_zones_humides.py

@@ -227,7 +227,6 @@ LEFT JOIN outflow USING (zh_uuid)
 LEFT JOIN functions USING (zh_uuid)
 LEFT JOIN especes USING (zh_uuid)
 --group BY zh_uuid
-WHERE code not like '38CENIS%'
 order by code
 ;
 '''

5_GEONATURE/GN_ZH/tmp/epode.py

@@ -1,22 +0,0 @@
-from pycen import con_gn,update_to_sql
-from os import path
-import geopandas as gpd
-
-PATH = '/media/colas/SRV/FICHIERS'
-FILE = 'OUTILS/CARTOGRAPHIE/ESPACE DE TRAVAIL/ETUDES/Zones humides/ACTUALISATION 2024/BE EPODE - LEZE/KIT INVENTAIRE38 MODIFIE/a envoyer prêt/GEOM/38CG0105_Epode2025 (à intégrer).gpkg'
-
-tmp = (gpd.read_file(path.join(PATH, FILE))
-    .rename(columns={'CODE_ZH':'code'})
-    .rename_geometry('geom')
-    )
-
-if tmp.crs.srs.lower() != 'epsg:4326':
-    tmp = tmp.to_crs(4326)
-
-update_to_sql(
-    tmp[['code','geom']],
-    con_gn,
-    't_zh',
-    'pr_zh',
-    'code'
-)

5_GEONATURE/GN_ZH/tmp/insert_ddt_2024.py

@@ -7,15 +7,11 @@ PATH = '/home/colas/Documents/9_PROJETS/1_ZH/2024/CARTO/Couches SIG'
 FILE = 'ZH_zh DDT 2024_MJ_modif 2025.shp'
 
 df = (gpd.read_file(path.join(PATH, FILE))
-    .rename(columns={'Code ZH':'code','date':'update_date'})
-    .rename_geometry('geom')
-    )
-df.geom = df.geom.buffer(0).to_crs(4326)
+    .rename(columns={'Code ZH':'code','date':'update_date'}))
 df['update_author'] = 24 # 24 = Mathieu Juton
 
-
 update_to_sql(
-    df[['code','update_author', 'update_date','geom']],
+    df[['code','update_author', 'update_date']],
     con_gn,
     't_zh',
     'pr_zh',

5_GEONATURE/GN_ZH/tmp/maj_geom.py

@@ -1,23 +0,0 @@
-#!/usr/bin/env python3
-# -*- coding: UTF-8 -*-
-import geopandas as gpd
-from pycen import con_gn, update_to_sql
-from os import path
-
-PATH = '/media/colas/SRV/'
-FILE = 'FICHIERS/OUTILS/CARTOGRAPHIE/ESPACE DE TRAVAIL/ETUDES/Zones humides/diag_zh_GAM/ZH_Séchilienne/zh_sapey.gpkg'
-df = (gpd.read_file(path.join(PATH, FILE))
-  .rename(columns={'code_zh':'code'})
-  .rename_geometry('geom'))
-
-if df.crs.srs.lower() != 'epsg:4326':
-    df = df.to_crs(4326)
-
-update_to_sql(
-    df[['code','geom']],
-    con_gn,
-    't_zh',
-    'pr_zh',
-    'code'
-)
-

5_GEONATURE/check_data.py

@@ -1,138 +0,0 @@
-#!/usr/bin/env python3
-# -*- coding: UTF-8 -*-
-from sqlalchemy import text
-
-def check_missing_data(con):
-    sql = '''
-        WITH t1 AS (SELECT 
-            --tro.*,too.* 
-            tro.unique_id_sinp_grp
-            FROM pr_occtax.t_occurrences_occtax AS too
-            JOIN pr_occtax.t_releves_occtax tro USING (id_releve_occtax)
-            WHERE too.id_occurrence_occtax NOT IN (
-                SELECT cco.id_occurrence_occtax FROM pr_occtax.cor_counting_occtax cco
-            )
-        )
-        SELECT 
-            s.id_synthese,
-            too.id_releve_occtax,
-            too.id_occurrence_occtax,
-            tro.id_digitiser,
-            s.date_min,
-            dataset_name,
-            dataset_shortname,
-            geom_local geom,
-            meta_device_entry,
-            tro.id_digitiser,
-            tro.date_min,
-            tro.date_max,
-            too.cd_nom,
-            too.nom_cite,
-            s.nom_cite nom_cite_synthese,
-            s.cd_nom cd_nom_synthese,
-            s.last_action
-        FROM pr_occtax.t_occurrences_occtax AS too
-        JOIN pr_occtax.t_releves_occtax tro USING (id_releve_occtax)
-        JOIN gn_meta.t_datasets USING (id_dataset)
-        LEFT JOIN pr_occtax.cor_counting_occtax cco USING (id_occurrence_occtax)
-        LEFT JOIN gn_synthese.synthese s on s.unique_id_sinp = cco.unique_id_sinp_occtax 
-        WHERE tro.unique_id_sinp_grp IN (SELECT t1.unique_id_sinp_grp FROM t1)
-            AND (too.nom_cite != s.nom_cite OR s.nom_cite is null)
-        ORDER BY too.id_releve_occtax
-        ;
-    '''
-    with con.begin() as cnx:
-        return cnx.execute(text(sql)).fetchall()
-    
-def check_error_synthese(con):
-    sql = '''
-        WITH t1 AS (SELECT 
-            --tro.*,too.* 
-            tro.unique_id_sinp_grp
-            FROM pr_occtax.t_occurrences_occtax AS too
-            JOIN pr_occtax.t_releves_occtax tro USING (id_releve_occtax)
-        )
-        SELECT 
-            s.id_synthese,
-            too.id_releve_occtax,
-            too.id_occurrence_occtax,
-            tro.id_digitiser,
-            s.date_min,
-            dataset_name,
-            dataset_shortname,
-            geom_local geom,
-            meta_device_entry,
-            tro.id_digitiser,
-            tro.date_min,
-            tro.date_max,
-            too.cd_nom,
-            too.nom_cite,
-            s.nom_cite nom_cite_synthese,
-            s.cd_nom cd_nom_synthese,
-            s.last_action
-        FROM pr_occtax.t_occurrences_occtax AS too
-        JOIN pr_occtax.t_releves_occtax tro USING (id_releve_occtax)
-        JOIN gn_meta.t_datasets USING (id_dataset)
-        LEFT JOIN pr_occtax.cor_counting_occtax cco USING (id_occurrence_occtax)
-        LEFT JOIN gn_synthese.synthese s on s.unique_id_sinp = cco.unique_id_sinp_occtax 
-        WHERE tro.unique_id_sinp_grp IN (SELECT t1.unique_id_sinp_grp FROM t1)
-            AND (too.nom_cite != s.nom_cite OR s.nom_cite is null)
-        ORDER BY too.id_releve_occtax
-        ;
-    '''
-    with con.begin() as cnx:
-        return cnx.execute(text(sql)).fetchall()
-    
-
-def resolve_missing_data(con):
-    sql = '''
-        INSERT INTO pr_occtax.cor_counting_occtax (
-            id_occurrence_occtax,id_nomenclature_life_stage,id_nomenclature_sex,
-            id_nomenclature_obj_count,id_nomenclature_type_count,count_min,count_max,
-            additional_fields)
-        SELECT 
-            --	t.operation_type,
-            --	t.operation_date,
-            --	CAST(t.table_content->>'id_counting_occtax' AS BIGINT) id_occurrence_occtax,
-            CAST(t.table_content->>'id_occurrence_occtax' AS BIGINT) AS id_occurrence_occtax, 
-            CAST(t.table_content->>'id_nomenclature_life_stage' AS INT) AS id_nomenclature_life_stage, 
-            CAST(t.table_content->>'id_nomenclature_sex' AS INT) AS id_nomenclature_sex, 
-            CAST(t.table_content->>'id_nomenclature_obj_count' AS INT) AS id_nomenclature_obj_count, 
-            CAST(t.table_content->>'id_nomenclature_type_count' AS INT) AS id_nomenclature_type_count, 
-            CAST(t.table_content->>'count_min' AS INT) AS count_min, 
-            CAST(t.table_content->>'count_max' AS INT) AS count_max, 
-            CAST(t.table_content->>'additional_fields' AS JSON) AS additional_fields
-        FROM (
-            SELECT DISTINCT ON (d1.uuid_attached_row) 
-                d1.uuid_attached_row, d1.*
-            FROM pr_occtax.t_occurrences_occtax o
-            INNER JOIN gn_commons.t_history_actions o1 ON o.unique_id_occurence_occtax = o1.uuid_attached_row
-            INNER JOIN gn_commons.t_history_actions d1 ON d1.table_content->>'id_occurrence_occtax' = o1.table_content->>'id_occurrence_occtax'
-            INNER JOIN gn_commons.t_history_actions d2 ON d2.uuid_attached_row = d1.uuid_attached_row  
-            INNER JOIN gn_commons.t_history_actions o2 ON d2.table_content->>'id_occurrence_occtax' = o2.table_content->>'id_occurrence_occtax'
-            WHERE 
-                NOT EXISTS (SELECT NULL FROM pr_occtax.cor_counting_occtax c WHERE o.id_occurrence_occtax = c.id_occurrence_occtax) 
-                AND o1.id_table_location = 6 -- ID table t_occurrence_occtax
-                AND d1.id_table_location = 5 -- ID table cor_counting_occtax
-                AND d2.id_table_location = 5 -- ID table cor_counting_occtax
-                AND o2.id_table_location = 6 AND o2.operation_type = 'I' -- table t_occurrence_occtax
-                AND d2.table_content->>'id_occurrence_occtax' <> d1.table_content->>'id_occurrence_occtax'
-                AND d2.operation_date <> d1.operation_date
-                -- AND o1.table_content->>'id_releve_occtax' = '3522'
-            ORDER BY d1.uuid_attached_row, d1.operation_date DESC
-        ) AS t
-        ;'''
-    with con.begin() as cnx:
-        cnx.execute(text(sql))
-
-def resolve_synthese_errors(con):
-    sql = '''
-
-    '''
-
-if __name__ == '__main__':
-
-    from pycen import con_gn
-
-    check_missing_data(con_gn)
-    check_error_synthese(con_gn)

5_GEONATURE/manage_tools.py

@@ -1,44 +0,0 @@
-from pycen import con_gn
-from sqlalchemy.sql import text
-
-def update_additional_values(
-        con,table='cor_counting_occtax',shema='pr_occtax',
-        jsonb_column='additional_fields',keyfield='code_atlas'):
-    sql = text('''
-        UPDATE %(sch)s.%(tab)s
-        SET "%(jsonb_c)s" = JSONB_SET(
-            "%(jsonb_c)s", 
-            '{%(keyf)s}'::text[], 
-            TO_JSONB(
-                ref_nomenclatures.get_nomenclature_label(("%(jsonb_c)s"::json#>>'{%(keyf)s}')::int,
-                'default')
-            ), 
-            false)
-        WHERE ("%(jsonb_c)s"::json#>>'{%(keyf)s}')::text ~ '^[0-9\.]+$' 
-            AND ("%(jsonb_c)s"::json#>>'{%(keyf)s}')::int in (
-                SELECT id_nomenclature FROM ref_nomenclatures.t_nomenclatures t
-                JOIN ref_nomenclatures.bib_nomenclatures_types b USING (id_type) 
-                WHERE lower(b.mnemonique) = '%(keyf)s'
-        )
-    '''%{'keyf':keyfield,'tab':table,'sch':shema,'jsonb_c':jsonb_column})
-    # print(sql)
-
-    with con.begin() as cnx:
-        cnx.execute(sql)
-    
-def update_additional_key(
-    con,table='cor_counting_occtax',shema='pr_occtax',jsonb_column='additional_fields',
-    keyfield='Strate de végétation',new_keyfield='strate_flore'
-    ):
-    sql = text('''
-        UPDATE %(sch)s.%(tab)s
-        SET "%(jsonb_c)s" = "%(jsonb_c)s" - '%(keyf)s' || jsonb_build_object(
-            '%(new_keyf)s', "%(jsonb_c)s"->'%(keyf)s'
-        )
-        WHERE "%(jsonb_c)s" ? '%(keyf)s';
-    '''%{'keyf':keyfield,'new_keyf':new_keyfield,'tab':table,'sch':shema,'jsonb_c':jsonb_column})
-    # print(sql)
-
-    with con.begin() as cnx:
-        cnx.execute(sql)
-