update code

0_FONCIER/CADASTRE/transfert_cadastre.py

@@ -3,4 +3,4 @@
     # pg_dump -C -h localhost -U localuser dbname | psql -h remotehost -U remoteuser dbname
     # pg_dump -C -h 172.17.0.2 -U postgres -d postgres --schema="07_202107" | psql -h 91.134.194.221 -U cgeier -d bd_cen
     # RESTORE AU NOM DE LA BDD CIBLE
-    # pg_dump -C -h 172.17.0.2 -U postgres -d postgres --schema="*_202407" --format=custom | pg_restore -h 91.134.194.221 -U cgeier --dbname="cadastre"
+    # pg_dump -C -h 172.17.0.2 -U postgres -d postgres --schema="*_202501" --format=custom | pg_restore -h 91.134.194.221 -U cgeier --dbname="cadastre"

0_FONCIER/cutfantoir_bydep.py

@@ -3,12 +3,12 @@ import pandas as pd
 import csv
 
 path = '/media/colas/SRV/FICHIERS/TRANSFERTS-EQUIPE/CG/FONCIER/CADASTRE/2023/Fichier national FANTOIR (situation avril 2023)/'
-fan = path+'FANTOIR0423'
+fant = path+'FANTOIR0423'
 lst_dep = ['07','26','38','42']
 
 if __name__ == '__main__':
 
-    df = pd.read_table(fan,chunksize=500000)
+    df = pd.read_table(fant,chunksize=500000)
     d07 = pd.DataFrame()
     d26 = pd.DataFrame()
     d38 = pd.DataFrame()

0_FONCIER/foncier_insert_cadastre_V4.py

@@ -161,6 +161,14 @@ def drop_tables(con):
     with con.begin() as cnx:
         cnx.execute(sql)
 
+def where_parid(parid):
+    if not parid: return ""
+    return "AND parcelle.parcelle {} {}".format(
+        "IN" if isinstance(parid, (list,pd.Series)) and len(parid) > 1 else "=", 
+        tuple(parid) if isinstance(parid, (list,pd.Series)) and len(parid) > 1 
+        else "'%s'"%parid[0] if isinstance(parid, (list,pd.Series)) and len(parid) == 1 
+        else "'%s'"%parid
+    )
 
 # CENRA 2020
 def _insert_voie1(schema='38_202207',list_parid=None):
@@ -170,14 +178,19 @@ def _insert_voie1(schema='38_202207',list_parid=None):
     sql0 = '''set work_mem='512MB';
     INSERT into cadastre.vl
     SELECT
-        ccodep||ccocom||codvoi AS  vl_id, --character varying(10) NOT NULL, -->>> c'est pas le bon compte de caractères, mais je n'ai pas de doublons en auvergne
-        libvoi AS libelle,--character varying(50),
+        v.ccodep||v.ccocom||v.codvoi AS  vl_id, --character varying(10) NOT NULL, -->>> c'est pas le bon compte de caractères, mais je n'ai pas de doublons en auvergne
+        v.libvoi AS libelle,--character varying(50),
         null AS  geom --  geom geometry(MultiPolygon,2154),
-    FROM "{sch}".voie
-    WHERE ccodep||ccocom||codvoi IN (
+    FROM "{sch}".voie v
+    LEFT JOIN "{sch}".parcelle ON v.ccodep||v.ccocom||v.codvoi = parcelle.ccodep||parcelle.ccocom||parcelle.ccovoi
+    WHERE v.ccodep||v.ccocom||v.codvoi IN (
         SELECT DISTINCT ccodep||ccocom||ccovoi FROM "{sch}".parcelle )
     '''.format(
         sch=schema)
+    
+    if list_parid:
+        sql0 += where_parid(list_parid)
+
     with con_fon.begin() as cnx:
         cnx.execute(sql0)
 
@@ -195,6 +208,10 @@ def _insert_voie2(schema='38_202207',list_parid=None):
         SELECT ccodep||ccocom||codvoi AS vl_id FROM "{sch}".voie)
     '''.format(
         sch=schema)
+    
+    if list_parid:
+        sql0 += where_parid(list_parid)
+
     with con_fon.begin() as cnx:
         cnx.execute(sql0)
 def _insert_voie3(schema='38_202207',list_parid=None):
@@ -207,6 +224,10 @@ def _insert_voie3(schema='38_202207',list_parid=None):
     WHERE ccodep||ccocom||ccovoi NOT IN (SELECT vl_id from cadastre.vl)
     '''.format(
         sch=schema)
+    
+    if list_parid:
+        sql0 += where_parid(list_parid)
+
     with con_fon.begin() as cnx:
         cnx.execute(sql0)
 
@@ -274,11 +295,15 @@ def _insert_parcelle1(schema='38_202207',list_parid=None):
             -- Numéro Parcelle mère
             type_filiation AS "type", -- Type de filiation
             jdatat
-        FROM "{sch}".parcelle a
-            JOIN "{sch}".geo_parcelle ON geo_parcelle.geo_parcelle = a.parcelle
-        )
+        FROM "{sch}".parcelle
+            JOIN "{sch}".geo_parcelle ON geo_parcelle.geo_parcelle = parcelle.parcelle
+        
     '''.format(
         sch=schema)
+    
+    if list_parid:
+        sql += where_parid(list_parid).replace('AND','WHERE')
+    sql += ');'
     with con_fon.begin() as cnx:
         cnx.execute(sql)
 
@@ -290,7 +315,7 @@ def _insert_parcelle2(schema='38_202207',list_parid=None):
     On récupère la geom sur un EDIGEO antérieur'''
     sql = '''set work_mem='512MB';
     INSERT INTO cadastre.parcelles
-    ( WITH t1 as(
+    ( WITH t1 as (
     SELECT DISTINCT ON (a.ccodep || a.ccocom || replace(a.ccopre, ' ', '0') || replace(a.ccosec, ' ', '0') || a.dnupla)
         parcelle,
         a.ccodep || a.ccocom || replace(a.ccopre, ' ', '0') || replace(a.ccosec, ' ', '0') || a.dnupla AS par_id,
@@ -354,17 +379,22 @@ def _insert_parcelle2(schema='38_202207',list_parid=None):
         t1.jdatat
     FROM t1
         LEFT JOIN "{sch}".parcelle_info b ON t1.parcelle = b.geo_parcelle -- les parcelles sans geom
+        LEFT JOIN "{sch}".parcelle c ON t1.parcelle = c.parcelle -- les parcelles sans geom
         LEFT JOIN cadastre.parcelles_cen ON t1.par_id = parcelles_cen.par_id
     WHERE t1.par_id NOT IN (SELECT par_id FROM cadastre.parcelles)
     )
     '''.format(
         sch=schema)
+    
+    if list_parid:
+        sql += where_parid(list_parid)
+
     with con_fon.begin() as cnx:
         cnx.execute(sql)
 
-def insert_parcelle(schema='38_202207'):
-    _insert_parcelle1(schema)
-    _insert_parcelle2(schema)
+def insert_parcelle(schema='38_202207',list_parid=None):
+    _insert_parcelle1(schema,list_parid)
+    _insert_parcelle2(schema,list_parid)
     print('INSERT parcelle OK')
 
 
@@ -429,7 +459,7 @@ def check_proprio(schema='38_202207',con=con_fon):
     if not is_diff_dnomus.empty:
         update_synonyme_proprio(con,is_diff_dnomus,'dnomus',schema)
 
-def _insert_proprio(schema='38_202207'):
+def _insert_proprio(schema='38_202207',list_parid=None):
     sql = '''set work_mem='512MB';
     INSERT INTO cadastre.proprios
     SELECT DISTINCT
@@ -545,7 +575,8 @@ def _insert_r_prop_cptprop1(schema='38_202207'):
     FROM "{sch}".suf WHERE comptecommunal NOT IN (SELECT DISTINCT comptecommunal FROM "{sch}".proprietaire)
     '''.format(
         sch=schema,
-        dep=schema[:2])
+        dep=schema[:2]
+    )
     with con_fon.begin() as cnx:
         cnx.execute(sql)
 
@@ -555,10 +586,11 @@ def insert_r_prop_cptprop(schema='38_202207'):
     print('INSERT r_prop_cptprop OK')
 
 
-def _insert_lot1(schema='38_202207'):
+def _insert_lot1(schema='38_202207',list_parid=None):
     sql = '''set work_mem='512MB';
     INSERT INTO cadastre.lots (lot_id, par_id, dnulot, dcntlo)
     --les parcelles divisées en lots de la table lots
+    (WITH parcelle AS (
         SELECT DISTINCT
             ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla||dnulot AS id_lot, -- Identifiant du lot  character varying(21)
             ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla AS  par_id, -- Identifiant de la parcelle
@@ -591,9 +623,22 @@ def _insert_lot1(schema='38_202207'):
     FROM "{sch}".parcelle
         JOIN "{sch}".geo_parcelle ON parcelle.parcelle = geo_parcelle.geo_parcelle -- on ne garde que les parcelles dont on a la géométrie
     WHERE ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla IN
-            (SELECT ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla||trim(dnulot) FROM  "{sch}".suf); -- toutes les parcelles dont dnulot est NULL
+            (SELECT ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla||trim(dnulot) FROM  "{sch}".suf) -- toutes les parcelles dont dnulot est NULL
+    )
+    SELECT id_lot, par_id, dnulot, dcntlo
+    FROM parcelle
     '''.format(
         sch=schema)
+    
+    if list_parid:
+        list_parid = [x[:2] + x[3:] for x in list_parid]
+        sql += (where_parid(list_parid)
+            .replace('AND', 'WHERE')
+            .replace('.parcelle','.par_id')
+        )
+
+    sql += ');'
+
     with con_fon.begin() as cnx:
         cnx.execute(sql)
 
@@ -652,14 +697,17 @@ def _insert_lot2(schema='38_202207'):
     with con_fon.begin() as cnx:
         cnx.execute(sql)
 
+
 def insert_lot(schema='38_202207'):
     _insert_lot1(schema)
     _insert_lot2(schema)
     print('INSERT lot OK')
 
-def insert_cadastre(schema='38_202207'):
+
+def insert_cadastre(schema='38_202207',list_parid=None):
     sql = '''set work_mem='512MB';
     INSERT into cadastre.cadastre (lot_id, dnupro)
+    ( WITH t1 as (
         --les pdl
         SELECT DISTINCT
             ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla||dnulot AS lot_id, -- Identifiant du lot  character varying(21)
@@ -690,15 +738,45 @@ def insert_cadastre(schema='38_202207'):
         JOIN "{sch}".geo_parcelle ON parcelle.parcelle = geo_parcelle.geo_parcelle -- on ne garde que les parcelles dont on a la géométrie
     WHERE 
         ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla IN
-            (SELECT ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla||btrim(dnulot) FROM  "{sch}".suf); -- toutes les parcelles dont dnulot est NULL
+            (SELECT ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla||btrim(dnulot) FROM  "{sch}".suf) -- toutes les parcelles dont dnulot est NULL
+    )
+    SELECT lot_id, dnupro FROM t1
     '''.format(
         sch=schema)
+    
+    if list_parid:
+        sql += 'JOIN cadastre.lots l USING (lot_id) '
+        list_parid = [x[:2] + x[3:] for x in list_parid]
+        sql += (where_parid(list_parid)
+            .replace('AND', 'WHERE')
+            .replace('parcelle.parcelle','l.par_id')
+            )
+
+        sql += ');'
+
     with con_fon.begin() as cnx:
         cnx.execute(sql)
 
     print('INSERT cadastre OK')
 
-def insert_lotnatcult(schema='38_202207'):
+
+def cadastre_missing(con=con_fon):
+    sql = '''set work_mem='512MB';
+    INSERT into cadastre.cadastre (lot_id, dnupro)
+        SELECT DISTINCT
+            lot_id, -- Identifiant du lot  character varying(21)
+            dnupro
+        FROM cadastre.cadastre_cen
+        WHERE lot_id NOT IN (SELECT lot_id FROM cadastre.cadastre)
+            AND lot_id IN (SELECT lot_id FROM cadastre.lots)
+            AND dnupro IN (SELECT dnupro FROM cadastre.cptprop)
+        ;
+    '''
+    with con.begin() as cnx:
+        cnx.execute(sql)
+
+
+def insert_lotnatcult(schema='38_202207',list_parid=None):
     sql = '''set work_mem='512MB';
     INSERT INTO cadastre.lots_natcult (lot_id, dsgrpf, cnatsp, dclssf, ccosub, dcntsf)
         SELECT DISTINCT
@@ -716,11 +794,18 @@ def insert_lotnatcult(schema='38_202207'):
         ccodep||ccocom||replace(ccopre, ' ', '0')||replace(ccosec, ' ', '0')||dnupla||trim(dnulot) IN (SELECT lot_id FROM cadastre.lots)
     '''.format(
         sch=schema)
+    
+    if list_parid:
+        sql += (where_parid(list_parid)
+            .replace('parcelle.parcelle','suf.suf')
+        )
+        
     with con_fon.begin() as cnx:
         cnx.execute(sql)
 
     print('INSERT lotnatcult OK')
 
+
 def update_typprop(con=con_fon):
     sql = '''set work_mem='512MB';
         UPDATE 
@@ -744,10 +829,10 @@ if __name__ == "__main__":
     from pycen import update_to_sql
     # par = '3805050000E0523'
     par = None
-    sch = '38_202407'
+    sch = '38_202501'
     drop_tables(con_fon)
 
-    lst_sch = ['07_202407','26_202407','42_202407','38_202407']
+    lst_sch = ['07_202501','26_202501','42_202501','38_202501']
     for sch in lst_sch:
         print(' INIT ',sch)
         insert_voie(sch)
@@ -758,7 +843,14 @@ if __name__ == "__main__":
         insert_lot(sch)
         insert_cadastre(sch)
         insert_lotnatcult(sch)
+    cadastre_missing(con_fon)
     update_typprop(con_fon)
 
 # pg_restore -h 172.17.0.2 -U postgres --dbname="bd_cen" -c /home/colas/Documents/9_PROJETS/0_FONCIER/DUMP/bd_cen_20240418_16h50_beforemaj2023.dump
 
+_insert_lot1('38_202504','38405000ZD0209')
+
+
+
+insert_cadastre('38_202504','380405000ZD0209')
+insert_lotnatcult('38_202504','380405000ZD0209')

0_FONCIER/grant_table.py

@@ -46,7 +46,7 @@ def revoke_all_table(con,sch):
     
 
 if __name__ == "__main__":
-    sch_cad = '42_202407'
+    sch_cad = '38_202501'
     sch_old = '42_202207'
     grant_all_table(con_cad,sch_cad)
     # revoke_all_table(con_cad,sch_old)

2_MEDWET/0_BROUILLONS/recup_zh.py

@@ -81,7 +81,7 @@ df_structure.rename(columns={'organisme_auteur':'nom'}, inplace=True)
 #   labels=[
 #     # 1092,748,1088,
 #     17],
-#   axis=0, 
+#   axis=0,
 #   inplace=True)
 df_structure['nom_autres'] = None
 df_structure.loc[df_structure.nom == 'Acer campestre', 'nom_autres'] = 'ACER CAMPESTRE'

3_AZALEE/azaleeTOgeonature.py

@@ -4,6 +4,7 @@
 from pycen import con_gn, zh, pers
 import pandas as pd
 import geopandas as gpd
+import numpy as np
 import uuid
 import re
 zh = zh()
@@ -136,9 +137,13 @@ def cor_lim_list(crit_delim):
     delim.mnemo = delim.mnemo.str.replace(r'.\(.*\)','',regex=True)
     dict_delim = dict(zip(delim.mnemo.str.lower(),delim.id_nomenclature))
 
-    serie = crit_delim\
-        .fillna('non déterminé')\
-        .str.split(';',expand=True).stack().droplevel(-1).reset_index()
+    serie = (crit_delim
+        .fillna('non déterminé')
+        .str.split(';',expand=True)
+        .stack()
+        .str.strip()
+        .droplevel(-1)
+        .reset_index())
     serie.columns = ['id','delim']
     serie.set_index('id',inplace=True)
     serie['id_lim'] = serie.delim.str.replace(r'.\(.*\)','',regex=True)
@@ -225,7 +230,7 @@ def to_bib_organismes_przh():
         .replace({'Inconnu':'Autre'})
 
     to_insert = insert_from[~insert_from.nom.str.lower().isin(isin_db.name.str.lower())]
-    to_insert.abbrev = remove_special_char(to_insert.abbrev,space=True)\
+    to_insert.loc[to_insert.abbrev.notna(),'abbrev'] = remove_special_char(to_insert[to_insert.abbrev.notna()].abbrev,space=True)\
         .str.upper()\
         .str[:6]
     to_insert.loc[to_insert.abbrev.notna()]\
@@ -297,7 +302,7 @@ def get_id_t_zh(code=None):
     sql = "SELECT id_zh,zh_uuid,code FROM pr_zh.t_zh"
     if isinstance(code,str):
         sql += " WHERE code='%s'"%code
-    elif isinstance(code,list) or isinstance(code,pd.Series) or isinstance(code,pd.Index):
+    elif isinstance(code,(list,pd.Series,pd.Index,pd._libs.testing.np.ndarray)):
         sql += " WHERE code IN %s"%str(tuple(code))
     return pd.read_sql_query(sql,con_gn)
 
@@ -525,13 +530,23 @@ def to_t_zh(DF):
     org = get_id_org_przh()
     dict_org = dict(zip(org.name,org.id_org))
     # First modif = update_author. Important
+
     test_auth = df.create_author.str.contains(';',na=False)
     if test_auth.any():
-        df.loc[test_auth,'update_author'] = df.loc[test_auth,'create_author'].str.split(';',expand=True)[1]
-        df.loc[test_auth,'create_author'] = df.loc[test_auth,'create_author'].str.split(';',expand=True)[0]
+        df.loc[test_auth,'update_author'] = df.loc[test_auth,'create_author'].str.split(';',n=1,expand=True)[1]
+        df.loc[test_auth,'create_author'] = df.loc[test_auth,'create_author'].str.split(';',n=1,expand=True)[0]
+
+    test_updt1 = df.update_author.str.contains(';',na=False)
+    if test_updt1.any():
+        df.loc[test_updt1,'update_author'] = df.loc[test_updt1,'update_author'].str.split(';',n=1,expand=True)[0]
+
+    test_updt2 = df.update_author=='CEN Isère'
+    if test_updt2.any():
+        df.loc[test_updt2,'update_author'] = df[test_updt2].create_author
 
     df['create_author'] = recup_id_role(author=df['create_author'])
     df['update_author'] = recup_id_role(author=df['update_author'])
+    df.loc[df.update_author.isna(),'update_author'] = df[df.update_author.isna()].create_author
 
     df['id_org'] = [t_role.loc[t_role.index==x,'nom_organisme'].values[0] for x in df['create_author']]
     df.id_org.replace(dict_org,inplace=True)
@@ -555,7 +570,7 @@ def to_t_zh(DF):
     # df['is_other_inventory'] = None     # A mettre à jour depuis MEDWET
     # df['is_carto_hab'] = None           # défault : False
     # df['nb_hab'] = [len(x) if x else None for x in df.code_cb.str.split(';')]     # Concerne les HABs Patrimoniaux
-    df = df.merge(find_nb_hab_bylbcode(df),on='id_zh',how='left')
+    # df = df.merge(find_nb_hab_bylbcode(df),on='id_zh',how='left')
     # df['total_hab_cover'] = 100                                                   # Concerne les HABs Patrimoniaux ; Ne peut pas être rempli.
     df['remark_eval_functions'] = df.rmq_fct_majeur.copy()
     df['remark_eval_heritage'] = df.rmq_interet_patri.copy()
@@ -606,12 +621,22 @@ def to_t_zh(DF):
     print('INSERT cor_zh_hydro OK !')
     _cor_zh_(tzh_code=to_tzh.code,typ='rb')
     print('INSERT cor_zh_rb OK !')
+    print('END t_zh')
+
 
 
 
 def to_cor_zh_lim_fs(df):
-    df = df[['code','crit_def_esp']]\
+    _df = (df[['code','crit_def_esp']]
         .fillna('Non déterminé')
+        .copy())
+    df = (_df.set_index('code')
+        .crit_def_esp.str.split(';',expand=True)
+        .stack()
+        .droplevel(-1)
+        .str.strip()
+        .to_frame('crit_def_esp')
+        .reset_index(drop=False))
     cor_zh_lim_fs = pd.merge(df,get_id_t_zh(df.code),on='code')\
         .rename(columns={'crit_def_esp':'id_lim_fs'})
     crit_def_esp_fct = t_nomenclature_ZH('CRIT_DEF_ESP_FCT')
@@ -621,11 +646,14 @@ def to_cor_zh_lim_fs(df):
         name='cor_zh_lim_fs',con=con_gn,schema='pr_zh',if_exists='append',index=False
     )
 
+    print('END zh_lim_fs')
 
-def get_azalee_activity():
+
+def get_azalee_activity(code=None):
     sql = """
-    SELECT
+    SELECT DISTINCT ON (a.id_site,a.id_position,a.id_activ_hum)
         g.id_site code,
+		a.date,
         CASE WHEN length(pa.id::varchar)=1
             THEN '0'||pa.id::varchar||' - '||pa.nom
             ELSE pa.id::varchar||' - '||pa.nom
@@ -639,11 +667,16 @@ def get_azalee_activity():
         LEFT JOIN zones_humides.param_position pp ON pp.id = a.id_position
         LEFT JOIN zones_humides.param_impact pi ON pi.id = a.id_impact
         JOIN (sites.r_sites_geom g JOIN sites.sites s ON s.id = g.id_site)
-            ON g.id = a.id_geom_site
-    WHERE g.date = (SELECT max(dat) FROM (values (g.date)) AS value(dat))
-        and a."valid"
+            USING (id_site)
+    WHERE --g.date = (SELECT max(dat) FROM (values (g.date)) AS value(dat)) and
+         a."valid"
         and s.date_fin is NULL
     """
+    if isinstance(code,str):
+        sql += " AND a.id_site='%s'"%code
+    elif isinstance(code,(list,pd.Series,pd.Index,pd._libs.testing.np.ndarray)):
+        sql += " AND a.id_site IN %s"%str(tuple(code))
+    sql += " ORDER BY a.id_site,a.id_position,a.id_activ_hum,a.date DESC;"
     return pd.read_sql_query(sql,zh.con)
 
 
@@ -654,21 +687,28 @@ def get_cor_impact_types():
 def to_t_activity(df=None):
     table = 't_activity'
 
-    if df is None:
-        df = get_azalee_activity()\
-            .drop_duplicates()
-    else:
-        df = df[['code','activ_hum','impact','position','rmq_activ_hum']]
-        activ_hum = df.activ_hum.str.split(';',expand=True).stack()
-        impact = df.impact.str.split(';',expand=True).stack()
-        position = df.position.str.split(';',expand=True).stack()
-        rmq_activ_hum = df.rmq_activ_hum.str.split(';',expand=True).stack()
+    code = None if df is None else df.code.unique()
+    df = (get_azalee_activity(code)
+            .drop_duplicates())
+    
+    # if df is None:
+    #     df = get_azalee_activity()\
+    #         .drop_duplicates()
+    # else:
+    #     df = df[['code','activ_hum','impact','position','rmq_activ_hum']]
+    #     activ_hum = df.activ_hum.str.split(';',expand=True).stack()
+    #     impact = df.impact.str.split(';',expand=True).stack()
+    #     position = df.position.str.split(';',expand=True).stack()
+    #     rmq_activ_hum = df.rmq_activ_hum.str.split(';',expand=True).stack()
+
 
     # df['activ_hum'] = remove_special_char(df['activ_hum'],space=True)
     # df['impact'] = remove_special_char(df['impact'],space=True)
+    df['impact'].fillna('non déterminé',inplace=True)
+    df['impact'].replace({'Inconnu':'non déterminé'},inplace=True)
     df['impact'] = remove_special_char(df['impact'].str.lower(),space=True)
-    df['impact'].fillna('aucun',inplace=True)
     # df['position'] = remove_special_char(df['position'],space=True)
+    df['position'].replace({'Inconnu':'Non déterminée'},inplace=True)
 
     no_activ_hum = t_nomenclature_ZH('ACTIV_HUM')
     dict_activ_hum = dict(zip(no_activ_hum.mnemo,no_activ_hum.id_nomenclature))
@@ -696,12 +736,12 @@ def to_t_activity(df=None):
         x[0] if len(x)==1 else no_position.loc[no_position.cd_nomenclature=='3','id_nomenclature'].values[0] 
         for x in group_df.id_position 
     ]
-    group_df.remark_activity = ['\n'.join(list(set(x))) if list(set(x)) != [None] else None for x in group_df.remark_activity]
+    group_df.remark_activity = ['\n'.join(list(set(filter(lambda item: item is not None, x)))) if list(set(x)) != [None] else None for x in group_df.remark_activity]
 
     group_df['id_impact_list'] = [uuid.uuid4() for x in group_df.index]
-    cor_impact_list = group_df[['id_impact_list','id_cor_impact_types']]\
-        .explode('id_cor_impact_types')\
-        .drop_duplicates()
+    cor_impact_list = (group_df[['id_impact_list','id_cor_impact_types']]
+        .explode('id_cor_impact_types')
+        .drop_duplicates())
 
     # activity   = pd.merge(group_df[['code','id_activity','id_impact_list','id_position']],df,on=['code','id_activity','id_position'],how='left')
     # t_activity = pd.merge(activity,get_id_t_zh(df.code),on='code')
@@ -713,24 +753,19 @@ def to_t_activity(df=None):
     to_tactiv.to_sql(
         name=table, con=con_gn, schema='pr_zh', 
         if_exists='append', index=False, 
-        # dtype={
-        #     'id_impact_list':uuid.UUID
-        # }
     )
 
     cor_impact_list.to_sql(
         name='cor_impact_list', con=con_gn, schema='pr_zh', 
         if_exists='append', index=False, 
-        # dtype={
-        #     'id_impact_list':uuid.UUID
-        # }
     )
+    print('END t_activity')
 
 
-def get_azalee_functions():
+def get_azalee_functions(code=None):
     sql = """
-    SELECT
-        g.id_site code,
+    SELECT DISTINCT ON (a.id_site,a.id_fct)
+        a.id_site code,
         pa.nom id_function,
         a."quantite", 
         a.description justification, 
@@ -738,26 +773,36 @@ def get_azalee_functions():
     FROM zones_humides.r_site_fctecosociopatri a
         LEFT JOIN zones_humides.param_fct_eco_socio_patri pa ON pa.id = a.id_fct
         JOIN (sites.r_sites_geom g JOIN sites.sites s ON s.id = g.id_site)
-            ON g.id = a.id_geom_site
-    WHERE g.date = (SELECT max(dat) FROM (values (g.date)) AS value(dat))
-        and a."valid"
+            USING (id_site)
+    WHERE
+        a."valid"
         and s.date_fin is NULL
     """
+    if isinstance(code,str):
+        sql += " AND a.id_site='%s'"%code
+    elif isinstance(code,(list,pd.Series,pd.Index,pd._libs.testing.np.ndarray)):
+        sql += " AND a.id_site IN %s"%str(tuple(code))
+
+    sql += " ORDER BY a.id_site,a.id_fct,a.date DESC;"
     return pd.read_sql_query(sql,zh.con)
 
 
 def to_t_functions(df=None):
     table = 't_functions'
 
-    if df is None:
-        func = get_azalee_functions()
-        func.id_function.replace({' / ':'/'},regex=True,inplace=True)
-    else:
-        func = df[['code','fct_bio','fct_hydro','int_patri','val_socioEco']].set_index('code').unstack()
-        func = func.str.split(';',expand=True).stack()\
-            .str.split(' \(',1,expand=True)
-        func.columns = ['id_function','justification']
-        func.justification = func.justification.str.rsplit('\)',1,expand=True)[0]
+    code = None if df is None else df.code.unique()
+    func = get_azalee_functions(code)
+    func.id_function.replace({' / ':'/'},regex=True,inplace=True)
+
+    # if df is None:
+    #     func = get_azalee_functions()
+    #     func.id_function.replace({' / ':'/'},regex=True,inplace=True)
+    # else:
+    #     func = df[['code','fct_bio','fct_hydro','int_patri','val_socioEco']].set_index('code').unstack()
+    #     func = func.str.split(';',expand=True).stack()\
+    #         .str.split(' \(',1,expand=True)
+    #     func.columns = ['id_function','justification']
+    #     func.justification = func.justification.str.rsplit('\)',1,expand=True)[0]
     
     functions = pd.concat([
         t_nomenclature_ZH('FONCTIONS_HYDRO'),t_nomenclature_ZH('FONCTIONS_BIO'),
@@ -783,12 +828,14 @@ def to_t_functions(df=None):
     t_func = pd.merge(funct,get_id_t_zh(funct.code),on='code')
     tactiv_cols = recup_cols_table(table,con_gn)
     lst_cols = t_func.columns[t_func.columns.isin(tactiv_cols)]
-    to_tfunction = t_func[lst_cols]
+    ident_no_func = t_func.id_function.isin(['aucun intérêt patrimonial','aucune fonction biologique'])
+    to_tfunction = t_func.loc[~ident_no_func,lst_cols]
 
     to_tfunction.to_sql(
         name=table, con=con_gn, schema='pr_zh', 
         if_exists='append', index=False
     )
+    print('END t_functions')
 
 def add_remark_pres(not_bib):
     table = 't_zh'
@@ -821,10 +868,10 @@ def __format_lb_code__(t):
     df_cb = t[cols].copy()
     df_cb.set_index('code',inplace=True)
 
-    zh_cb = df_cb.code_cb.str.split(';',expand=True)\
-        .stack()\
-        .droplevel(-1)\
-        .reset_index()
+    zh_cb = (df_cb.code_cb.str.split(';',expand=True)
+        .stack()
+        .droplevel(-1)
+        .reset_index())
     zh_cb.columns = cols
     zh_cb.rename(columns={'code_cb':'lb_code'},inplace=True)
 
@@ -908,6 +955,11 @@ def to_t_flow(DF, type_flow=None):
     dict_flow = dict(zip(_flow.mnemo,_flow.id_nomenclature))
     dict_perm = dict(zip(_perm.mnemo.str.lower(),_perm.id_nomenclature))
     
+    test_ruis = inflow.flow=='Ruissellement diffus'
+    if test_ruis.any() and type_flow=='outflow':
+        idx = inflow[test_ruis].index
+        inflow.drop(idx,inplace=True)
+
     inflow.flow.replace(dict_flow,inplace=True)
     inflow.perm.fillna('non déterminé',inplace=True)
     inflow.perm.replace({'inconnu':'non déterminé','':'non déterminé'},inplace=True)
@@ -923,6 +975,15 @@ def to_t_flow(DF, type_flow=None):
         name=table, con=con_gn, schema='pr_zh', 
         if_exists='append', index=False
     )
+    print('END t_flow')
+
+
+def check_corine_cover_inbdd(df):
+    sql = '''
+        SELECT * FROM (VALUES %s ) as t (id_zh, id_cover)
+        WHERE (id_zh, id_cover) NOT IN (SELECT id_zh, id_cover FROM pr_zh.cor_zh_corine_cover)
+    '''%','.join([str(tuple(x)) for x in df.to_dict('split',index=False)['data']])
+    return pd.read_sql_query(sql,con_gn)
 
 
 def cor_zh_corine_cover():
@@ -955,22 +1016,26 @@ def cor_zh_corine_cover():
         predicate = 'intersects', 
         how = 'inner')
 
-    cor_zh_clc = tmp[['id_zh','CODE_12']]\
-        .drop_duplicates()\
-        .rename(columns={'CODE_12':'id_cover'})\
-        .replace({'id_cover':dict_clc1})\
-        .replace({'id_cover':dict_clc2})
-        
+    _cor_zh_clc = (tmp[['id_zh','CODE_12']]
+        .drop_duplicates()
+        .rename(columns={'CODE_12':'id_cover'})
+        .replace({'id_cover':dict_clc1})
+        .replace({'id_cover':dict_clc2}))
+    
+    cor_zh_clc = check_corine_cover_inbdd(_cor_zh_clc)
+
     cor_zh_clc.to_sql(
         name=table, con=con_gn, schema='pr_zh', 
         if_exists='append', index=False
     )
+    print('END cor_zh_corine_cover')
 
 
 def migrate_to_gnZH(df:pd.DataFrame=None):
     to_bib_organismes_przh()
     to_t_zh(df)
     to_cor_zh_lim_fs(df)
+    to_cor_zh_cb(df)
     to_t_activity(df)
     to_t_functions(df)
     to_t_flow(df,type_flow='inflow')
@@ -978,7 +1043,6 @@ def migrate_to_gnZH(df:pd.DataFrame=None):
     cor_zh_corine_cover()
 
 
-
 def to_t_references(db_file, suffixe_refnum=None):
     import pandas_access as mdb
     table = 't_references'
@@ -1119,12 +1183,14 @@ def trunc_table(table,cascade=False):
     with con_gn.begin() as cnx:
         cnx.execute(sql)
 
+
 if __name__ == "__main__":
 
     # TRUNCATE TABLE
     # trunc_table('t_zh',cascade=True)
     # trunc_table('cor_zh_area')
-    # trunc_table('t_reference')
+    # trunc_table('t_references',cascade=True)
+    # trunc_table('cor_lim_list')
 
 
     from pycen.geonature import pr_zh

3_AZALEE/create_view_zh3.py

@@ -20,7 +20,7 @@ url = URL.create('postgresql+psycopg2',
   host=adr,
   database=base,
 )
-con = create_engine(url)
+# con = create_engine(url)
 
 drop_v_zh = 'DROP VIEW IF EXISTS zones_humides.v_zoneshumides CASCADE;'
 with con.begin() as cnx:
@@ -212,17 +212,7 @@ v_zh_fctecosociopatri_cross = """
 DROP VIEW IF EXISTS zones_humides.v_zh_fctecosociopatri_cross;
 CREATE OR REPLACE VIEW zones_humides.v_zh_fctecosociopatri_cross
 AS
-SELECT DISTINCT ON (id_site)
-    --id_geom_site,
-    id_site,
-	auteur,
-    "date",
-    fct_bio,
-    fct_hydro,
-    int_patri,
-    "val_socioEco"
-FROM crosstab(
-    $$	WITH auteur AS (
+WITH auteur AS (
         SELECT DISTINCT ON (id_sitefct)
             c.id_sitefct,
             string_agg(c1.auteur,';' ORDER BY c1.auteur) auteur
@@ -230,11 +220,33 @@ FROM crosstab(
             JOIN personnes.v_personne c1 ON c1.id = c.id_auteur
         GROUP BY c.id_sitefct
         ORDER BY 1
-    ), 	tmp_select as (
+    ),max_author as (
+		SELECT DISTINCT ON (id_site)
+			a.id_site,
+			--(SELECT regexp_split_to_table(auth,',') FROM (values (string_agg(auteur,',' order by ROW()))) AS value(auth) Limit 1) auteur,
+			auteur,
+			a."date"
+		FROM auteur
+		JOIN zones_humides.r_site_fctecosociopatri a ON id_sitefct = a.id
+		order by 1,3 DESC,2
+	)
+SELECT DISTINCT ON (id_site)
+    --id_geom_site,
+    id_site,
+	--(SELECT auteur ORDER BY ct."date" DESC) "date",
+    "date",
+	auteur,
+    fct_bio,
+    fct_hydro,
+    int_patri,
+    "val_socioEco"
+FROM crosstab(
+    $$	WITH tmp_select as (
 		SELECT
+			max(a."id") id_sitefct,
 			id_site,
-			(SELECT regexp_split_to_table(auth,',') FROM (values (string_agg(d.auteur,',' order by ROW()))) AS value(auth) Limit 1) auteur,
-			MAX(a.date) date,
+			--(SELECT regexp_split_to_table(auth,',') FROM (values (string_agg(d.auteur,',' order by ROW()))) AS value(auth) Limit 1) auteur,
+			--MAX(a.date) date,
 			c.nom_court type_param,
 			b.nom,
 			string_agg(DISTINCT a.description,'\n') remark
@@ -242,20 +254,15 @@ FROM crosstab(
 			JOIN (zones_humides.param_fct_eco_socio_patri b 
 				JOIN zones_humides.type_param_fct c ON b.id_type = c.id 
 			) ON a.id_fct = b.id
-			JOIN auteur d ON d.id_sitefct = a.id
+		--JOIN auteur d ON d.id_sitefct = a.id
 		WHERE a."valid"
 		GROUP BY a.id_site,c.nom_court,b.nom
 		ORDER BY a.id_site,c.nom_court DESC,b.nom
 	)
 	SELECT 
 		id_site,
-		
-			string_agg(
-				DISTINCT CASE WHEN extract(year from date)>'1' 
-				THEN auteur||'-'|| extract(year from date) 
-				ELSE auteur END,
-			'; ') auteur,
-		MAX(date) date,
+		--(SELECT regexp_split_to_table(auth,',') FROM (values (string_agg(d.auteur,',' order by ROW()))) AS value(auth) Limit 1) auteur,
+		--MAX("date") "date",
 		type_param,
         string_agg(distinct
         CASE WHEN remark IS NULL THEN nom
@@ -263,19 +270,23 @@ FROM crosstab(
             ELSE CONCAT(nom,' (',remark,')') END,
         ';') fct
 	FROM tmp_select
-	GROUP BY 1,4
-	ORDER BY 1,4,3;$$,
+		--JOIN auteur d using (id_sitefct) 
+	GROUP BY id_site,type_param
+	ORDER BY id_site,type_param;$$,
     $$SELECT DISTINCT nom_court FROM zones_humides.type_param_fct ORDER BY 1 ASC;$$
 ) AS ct (
-    "id_site" text, 
-    "auteur" text,
-    "date" date,
-    "fct_bio" text, 
-    "fct_hydro" text, 
+    "id_site" text,
+    --"auteur" text,
+    --"date" date,
+    "fct_bio" text,
+    "fct_hydro" text,
     "int_patri" text,
-    "val_socioEco" text)
+    "val_socioEco" text
+	)
+JOIN max_author USING (id_site)
 --GROUP BY id_site,auteur,fct_bio,fct_hydro,int_patri,"val_socioEco"
-ORDER BY id_site,"date" desc,row_number() OVER (ORDER BY id_site) desc
+--WHERE id_site in ('38CG0110','38RD0057','38VS0063')
+ORDER BY id_site,row_number() OVER (ORDER BY id_site) desc
 ;"""
 grant = """
 GRANT ALL ON TABLE zones_humides.v_zh_fctecosociopatri_cross TO grp_admin;
@@ -290,15 +301,7 @@ v_zh_critdelim_cross = """
 DROP VIEW IF EXISTS zones_humides.v_zh_critdelim_cross;
 CREATE OR REPLACE VIEW zones_humides.v_zh_critdelim_cross
 AS
-SELECT DISTINCT ON (id_site)
-    --id_geom_site,
-    id_site,
-    auteur,
-    "date",
-    crit_delim,
-    crit_def_esp
-FROM crosstab(
-    $$WITH auteur AS (
+WITH auteur AS (
         SELECT DISTINCT ON (id_sitedelim)
             c.id_sitedelim,
             string_agg(c1.auteur,';' ORDER BY c1.auteur) auteur
@@ -306,16 +309,27 @@ FROM crosstab(
             JOIN personnes.v_personne c1 ON c1.id = c.id_auteur
         GROUP BY c.id_sitedelim
         ORDER BY 1
-    )
-    SELECT 
+    ),max_author as (
+		SELECT DISTINCT ON (id_site)
+			a.id_site,
+			--(SELECT regexp_split_to_table(auth,',') FROM (values (string_agg(auteur,',' order by ROW()))) AS value(auth) Limit 1) auteur,
+			auteur,
+			a."date"
+		FROM auteur
+		JOIN zones_humides.r_site_critdelim a ON id_sitedelim = a.id
+		order by 1,3 DESC,2
+	)
+SELECT DISTINCT ON (id_site)
+    --id_geom_site,
+    id_site,
+    "date",
+    auteur,
+    crit_delim,
+    crit_def_esp
+FROM crosstab(
+    $$ SELECT 
         --a.id_geom_site::bigint,
         id_site,
-        string_agg(
-			DISTINCT CASE WHEN extract(year from a.date)>'1' 
-			THEN d.auteur||'-'|| extract(year from a.date) 
-			ELSE d.auteur END,
-		'; ') auteur,
-        MAX(a.date) date,
         c.nom_court type_param,
         string_agg( DISTINCT 
 			CASE WHEN a.description IS NULL THEN b.nom
@@ -326,19 +340,21 @@ FROM crosstab(
         JOIN (zones_humides.param_delim_fct b 
             JOIN zones_humides.type_param_delim_fct c ON b.id_type = c.id 
         ) ON a.id_crit_delim = b.id
-        JOIN auteur d ON d.id_sitedelim = a.id
+        --JOIN auteur d ON d.id_sitedelim = a.id
     WHERE a."valid"
-    GROUP BY 1,4
-    ORDER BY 3,1,2$$,
+    GROUP BY 1,2
+    ORDER BY 1$$,
     $$SELECT DISTINCT nom_court FROM zones_humides.type_param_delim_fct ORDER BY 1 DESC;$$
 ) AS ct (
     "id_site" text, 
-    "auteur" text,
-    "date" date,
+    --"auteur" text,
+    --"date" date,
     "crit_delim" text, 
     "crit_def_esp" text)
+JOIN max_author USING (id_site)
 --GROUP BY id_site,auteur,crit_delim,crit_def_esp
-ORDER BY id_site,"date" desc,row_number() OVER (ORDER BY id_site) desc
+--WHERE id_site in ('38CG0110','38RD0057','38VS0063')
+ORDER BY id_site,row_number() OVER (ORDER BY id_site) desc
 ;"""
 grant = """
 GRANT ALL ON TABLE zones_humides.v_zh_critdelim_cross TO grp_admin;

3_AZALEE/insert_zh.py

@@ -874,11 +874,14 @@ def insertAttrsFct(sh6,nom_typ_court=False):
 if __name__ == "__main__":
 
   from os import path
-  FILE_PATH = '/home/colas/Documents/9_PROJETS/1_ZH/MAJ/Actu 2024/TEREO - 20241002_ENVOI_SIG_ZH/ADD DATA'
-  GEOM_PATH = 'TEREO_newZH.gpkg'
-  DATA_PATH = 'Tableau_saisie_ZH_TEREO.xlsx'
+  FILE_PATH = '/home/colas/Documents/9_PROJETS/1_ZH/MAJ/Assistance GAM/actu_ZH'
+  GEOM_PATH = 'contour_ZH.gpkg'
+  DATA_PATH = 'Tableau_saisie_ZH.xlsx'
 
   Gdf = gpd.read_file(path.join(FILE_PATH,GEOM_PATH), crs='EPSG:2154')
+  Gdf.columns = Gdf.columns.str.lower()
+  Gdf.rename(columns={'code_site':'site_code'},inplace=True)
+
   # Gdf['site_code'] = '38GR0070'
   # lst = ['38BB0089','38BB0090','38BB0091','38BB0092']
   # gdf = gdf[gdf.site_code.isin(lst)]
@@ -990,8 +993,7 @@ if __name__ == "__main__":
   insertAttrsFct(sh6.dropna(axis=1,how='all'))
 
 
-
-  maj = sh1[sh1.maj=='MAJ GEOM'].copy()
+  maj = sh1[sh1.maj=='MAJ'].copy()
   lst_maj = [*maj.site_cod]
   # site = lst_maj[3]
   for site in lst_maj:

3_AZALEE/tmp/hab_aggreg_cbna_2024.py

@@ -1,3 +1,6 @@
+#!/usr/bin/env python3
+# -*- coding: UTF-8 -*-
+
 # 2024-11-26
 # LE script permet d'intégrer de nouvelles géométries
 # dans la table sites.r_sites_geom. Les AUTEURS ont été 
@@ -15,12 +18,12 @@ from sqlalchemy.engine import URL
 
 # isin_bdd = True
 # # Parametres bdd CEN38 OUT
-# user = 'cen_admin'
-# pwd  = "#CEN38@venir"
-# adr  = '91.134.194.221'
-# base = 'azalee_restore'
-# url  = URL.create("postgresql+psycopg2", username=user, password=pwd, host=adr, database=base)
-# con  = create_engine(url)
+user = 'cen_admin'
+pwd  = "#CEN38@venir"
+adr  = '91.134.194.221'
+base = 'azalee_restore'
+url  = URL.create("postgresql+psycopg2", username=user, password=pwd, host=adr, database=base)
+con  = create_engine(url)
 
 
 zh = ZH()
@@ -46,9 +49,11 @@ df.dropna(how='all',axis=1,inplace=True)
 # df.contains(r_geom.geom).any()
 # res = df.within(r_geom.unary_union)
 
+perc = 80
+
 zh_caract = df[df.zh=='caractéristique'].copy()
 zh_caract['surfzhall'] = zh_caract.groupby(['idpolyfinal'])['n06rechab'].transform('sum')
-lst_idpoly = zh_caract[zh_caract.surfzhall >= 75].idpolyfinal.unique()
+lst_idpoly = zh_caract[zh_caract.surfzhall >= perc].idpolyfinal.unique()
 # zh_caract.within(r_geom.unary_union)
 # zh_caract.contains(r_geom.unary_union).any()
 
@@ -59,7 +64,7 @@ no_inters = df[
     & (~df.n05lbhab.str.contains('invasif',na=False,case=False))
 ].copy()
 no_inters = no_inters.drop(columns=['id_site']).sjoin(r_geom[['id_site','geom']])
-no_inters.to_file(path.join(PATH,'inters.gpkg'),driver='GPKG',layer='no_inters75')
+no_inters.to_file(path.join(PATH,'inters.gpkg'),driver='GPKG',layer='no_inters%i'%perc)
 len(no_inters.id_site.unique())
 
 # Intersection Après 2015 - tout milieux
@@ -70,7 +75,7 @@ inters = df[
     & (~df.n05lbhab.str.contains('invasif',na=False,case=False))
 ].copy()
 inters = inters.drop(columns=['id_site']).sjoin(r_geom[['id_site','geom']])
-inters.to_file(path.join(PATH,'inters.gpkg'),driver='GPKG',layer='inters75')
+inters.to_file(path.join(PATH,'inters.gpkg'),driver='GPKG',layer='inters%i'%perc)
 len(inters.id_site.unique())
 
 # Intersection Après 2009 - milieux Forêts uniquement

5_GEONATURE/GN_ZH/ins_zh_from_api.py

@@ -1,7 +1,10 @@
+from csv import list_dialects
 import geopandas as gpd
 from uuid import uuid4
 import json,urllib.request
 from numpy import ndarray
+from geoalchemy2 import Geometry
+from sqlalchemy import text
 
 dict_columns = {
     'code_zh': 'code',
@@ -9,6 +12,11 @@ dict_columns = {
     'date_visite':'create_date',
 }
 
+def normalize_connexion(con):
+    if gpd.pd.__version__>'2.1.2':
+        return con.raw_connection()
+    else:
+        return con
 
 def get_nomenclature_id(con,cd,typ):
     """
@@ -32,33 +40,219 @@ def get_nomenclature_id(con,cd,typ):
         SELECT ref_nomenclatures.get_id_nomenclature('{typ}', '{cd}') 
     """.format(cd=cd,typ=typ)
     with con.begin() as cnx:
-        res = cnx.execute(sql)
+        res = cnx.execute(text(sql))
 
     return res.one()[0] if res else None
 
-def to_tzh(df,con):
+
+def _cor_zh_area(tzh_code,typ,cover=False):
+    """
+    @tzh : pd.Serie. Série de valeurs 
+        correspondants à la colonne pr_zh.t_zh."code".
+    @typ : str.  COM, DEP, ref_geo
+    """
+    from math import ceil
+
+    table = 'cor_zh_area'
+
+    sqltzh = """
+        SELECT zh.id_zh, zh.geom FROM pr_zh.t_zh zh WHERE zh."code" in {tzh_code}
+    """.format(tzh_code=tuple(tzh_code))
+    tzh = gpd.read_postgis(sqltzh,con_gn,crs=4326)
+
+    if tzh.crs.srs.lower()=='epsg:4326':
+        tzh.to_crs(2154,inplace=True)
+
+    sqllarea = """
+        SELECT l.id_area, l.geom FROM ref_geo.l_areas l
+        JOIN ref_geo.bib_areas_types bib USING (id_type)
+        WHERE bib.type_code='{typ}' and l."enable"
+    """.format(typ=typ)
+    larea = gpd.read_postgis(sqllarea,con_gn,crs=2154)
+
+    df = _calc_recouvrmt(larea,tzh).rename(columns={'perc_rcvmt':'cover'})
+
+    if cover:
+        df['cover'] = [ceil(x) for x in df.cover]  
+    else :
+        df.drop(columns=['cover'],inplace=True)
+
+    # return df
+    if not df.empty:
+        df.to_sql(
+            name=table, con=con_gn, schema='pr_zh', 
+            if_exists='append', index=False
+        )
+        print('INSERT %i correspondances'%df.shape[0])
+    else:
+        print('AUCUNE nouvelles correspondances identifiées')
+
+
+def _calc_recouvrmt(df1,df2,how='inner'):
+    '''
+    Calcule le recouvrement de df2 sur df1
+    pour chaque géométrie de df1:
+    Parameters
+    ----------
+    df1 : GeoDataFrame.
+    df2 : GeoDataFrame.
+    '''
+    iddf1 = df1.columns[0]
+    iddf2 = df2.columns[0]
+
+    # Jointure spaciale
+    tmp = gpd.sjoin(
+        df1,
+        df2[['geom']],
+        predicate = 'intersects', 
+        how = how)
+
+    tmp.dropna(subset=['index_right'],inplace=True)
+    tmp.index_right = tmp.index_right.astype(int)
+    tmp.reset_index(inplace=True)
+
+    tmp = tmp.join(
+        df2[['geom',iddf2]].rename(columns={'geom': 'right_geom'}), 
+        on=['index_right'], how='left')
+
+    tmp2 = tmp[['index_right','right_geom',iddf2]].copy() \
+        .rename(columns={'right_geom': 'geom'}) \
+        .set_geometry('geom')
+
+    tmp1 = tmp[[iddf1,'geom']].copy() \
+        .set_geometry('geom')
+
+    if not tmp1.geom.values.is_valid.all():
+        tmp1.loc[~tmp1.geom.values.is_valid,'geom'] = tmp1.loc[~tmp1.geom.values.is_valid,'geom'].buffer(0)
+
+    if not tmp2.geom.values.is_valid.all():
+        tmp2.loc[~tmp2.geom.values.is_valid,'geom'] = tmp2.loc[~tmp2.geom.values.is_valid,'geom'].buffer(0)
+
+    tmp['perc_rcvmt'] = (tmp1.intersection(tmp2).area/tmp1.area)*100
+
+    return tmp[[iddf1,iddf2,'perc_rcvmt']]
+
+
+def _cor_zh_hydro(tzh_code):
+    """
+    @tzh : pd.Serie. Série de valeurs 
+        correspondants à la colonne pr_zh.t_zh."code".
+    """
+    table = 'cor_zh_hydro'
+    sql = '''
+        SELECT h.id_hydro,zh.id_zh
+        FROM pr_zh.t_hydro_area h, pr_zh.t_zh zh
+        WHERE zh."code" in {tzh_code}
+        AND ST_INTERSECTS( ST_SetSRID(h.geom,4326),ST_MakeValid(ST_SetSRID(zh.geom,4326)))
+        AND (h.id_hydro,zh.id_zh) NOT IN (SELECT id_hydro,id_zh FROM pr_zh.cor_zh_hydro)
+    '''.format(tzh_code=tuple(tzh_code))
+    df = gpd.pd.read_sql_query(sql,con_gn)
+
+    if not df.empty:
+        df.to_sql(
+            name=table, con=con_gn, schema='pr_zh', 
+            if_exists='append', index=False
+        )
+        print('INSERT %i correspondances'%df.shape[0])
+    else:
+        print('AUCUNE nouvelles correspondances identifiées')
+
+
+def _cor_zh_(tzh_code,typ):
+    """
+    @tzh : pd.Serie. Série de valeurs 
+        correspondants à la colonne pr_zh.t_zh."code".
+    @typ : str. [hydro,rb]
+    """
+    typ = typ.lower()
+    table = 'cor_zh_%s'%typ
+    tab_typ = 't_hydro_area' if typ == 'hydro' else 't_river_basin'
+    id_typ  = 'id_hydro' if typ == 'hydro' else 'id_rb'
+    sql = '''
+        SELECT h.{id_typ},zh.id_zh
+        FROM pr_zh.{tab_typ} h, pr_zh.t_zh zh
+        WHERE zh."code" in {tzh_code}
+        AND ST_INTERSECTS( ST_SetSRID(h.geom,4326),ST_MakeValid(ST_SetSRID(zh.geom,4326)))
+        AND (h.{id_typ},zh.id_zh) NOT IN (SELECT {id_typ},id_zh FROM pr_zh.{tab_to})
+    ;'''.format(
+        tzh_code = tuple(tzh_code),
+        id_typ   = id_typ,
+        tab_typ  = tab_typ,
+        tab_to   = table)
+    df = gpd.pd.read_sql_query(sql,con_gn)
+
+    if not df.empty:
+        df.to_sql(
+            name=table, con=con_gn, schema='pr_zh', 
+            if_exists='append', index=False
+        )
+        print('INSERT %i correspondances'%df.shape[0])
+    else:
+        print('AUCUNE nouvelles correspondances identifiées')
+
+
+
+def to_tzh(df,con,lst_area):
     tab = 't_zh'
     sch = 'pr_zh'
+    con.connect()
     lst_columns = [
-        x['name'] for x in con.dialect.get_columns(con,tab,sch) if x['name'] in df.columns
+        x['name'] for x in con.dialect.get_columns(con.connect(),tab,sch) if x['name'] in df.columns
     ]
 
+    # con = normalize_connexion(con)
     to_ins = df[lst_columns].copy()
-    try:
-        to_ins.to_postgis(
-            name=tab,
-            con=con,
-            schema=sch,
-            index=False,
-            if_exists='append',
-            method='multi'
-        )
-    except Exception as e:
-        print(e)    
-    finally:
-        print("INSERT data TO t_zh OK !")
 
-        return gpd.pd.read_sql('SELECT id_zh,code FROM pr_zh.t_zh',con=con)
+    lst = []
+    for r,row in to_ins.iterrows():
+        tmplst = []
+        for v, vals in row.items():
+            if isinstance(vals,(str,int)):
+                if isinstance(vals,str) and vals.__contains__("'"):
+                    vals = vals.replace("'","''")
+                tmplst.append(vals)
+            else:
+                tmplst.append(str(vals))
+        lst.append(str(tuple(tmplst)))
+
+    sqlValue = ','.join(lst).replace('"',"'").replace("'nan'",'NULL')
+    sql = '''
+        INSERT INTO pr_zh.t_zh ({cols}) VALUES {vals}
+        RETURNING id_zh,code;
+    '''.format(
+        cols=','.join(to_ins.columns),
+        vals=sqlValue
+    )
+
+
+    try:
+        with con.begin() as cnx:
+            _res = cnx.execute(text(sql))
+            res = _res.fetchall()
+        # to_ins.to_postgis(tab,con,sch,if_exists='append',index=False,)
+    except Exception as e:
+        raise e    
+    
+    res_df = gpd.pd.DataFrame(res)
+    for area in lst_area:
+        cov = True if area == 'COM' else False
+        _cor_zh_area(tzh_code=res_df.code,typ=area,cover=cov)
+        print('INSERT cor_zh_area %s OK !'%area)
+    
+    # _cor_zh_hydro(tzh_code=res_df.code)
+    _cor_zh_(tzh_code=res_df.code,typ='hydro')
+    print('INSERT cor_zh_hydro OK !')
+    _cor_zh_(tzh_code=res_df.code,typ='rb')
+    print('INSERT cor_zh_rb OK !')
+
+    print("INSERT data TO t_zh OK !")
+    return res_df
+        # return gpd.pd.read_sql(
+        #     'SELECT id_zh,code FROM pr_zh.t_zh WHERE code {sym} {lst};'.format(
+        #         sym='IN' if to_ins.shape[0] > 1 else '=',
+        #         lst=str(tuple(to_ins.code)) if to_ins.shape[0] > 1 else "'%s'"%to_ins.code.to_list()[0]
+        #     ),
+        #     con=con)
         # id_zh = df[['code','pk']].rename(columns={'pk':'id_zh'})
 
 def to_cor_lim_list(cor_lim,con):
@@ -68,16 +262,26 @@ def to_cor_lim_list(cor_lim,con):
     :param con: a sqlalchemy connection
     :return: None
     """
-    _cor_lim = (cor_lim
-        .set_index('id_lim_list')
-        .cd_nomenclature_delimitation.str.split(',',expand=True)
-        .stack()
-        .str.strip()
-        .to_frame('cd_lim')
-        .droplevel(-1)
-    )
+    typ_class = list(set([tup.cd_nomenclature_delimitation.__class__ for tup in cor_lim.itertuples()]))
+    if typ_class[0] == list:
+        _cor_lim = (cor_lim
+            .set_index('id_lim_list')
+            .cd_nomenclature_delimitation
+            .explode()
+            .to_frame('cd_lim'))
+    else:
+        _cor_lim = (cor_lim
+            .set_index('id_lim_list')
+            .cd_nomenclature_delimitation.str.split(',',expand=True)
+            .stack()
+            .str.strip()
+            .to_frame('cd_lim')
+            .droplevel(-1)
+        )
     _cor_lim['id_lim'] = [get_nomenclature_id(con,x,'CRIT_DELIM') for x in _cor_lim.cd_lim]
     _cor_lim.drop('cd_lim',axis=1,inplace=True)
+
+    con = normalize_connexion(con)
     try:
         _cor_lim.to_sql(
             name='cor_lim_list',
@@ -116,8 +320,9 @@ def to_cor_zh_cb(id_zh,df,con):
         .explode()
         .str.strip()
         .to_frame('lb_code')
-        .droplevel(-1)
     )
+
+    con = normalize_connexion(con)
     try:
         cor_zh_cb.to_sql(
             name='cor_zh_cb',
@@ -144,7 +349,10 @@ def to_t_activity(id_zh,actv,con):
     
     t_activ = gpd.pd.DataFrame()
     for i,x in _activ.iterrows():
-        res = gpd.pd.DataFrame(json.loads(x['acti_impact']))
+        if isinstance(x['acti_impact'],str):
+            res = gpd.pd.DataFrame(json.loads(x['acti_impact']))
+        else : 
+            res = gpd.pd.DataFrame(x['acti_impact'])
         res['id_zh'] = x['id_zh']
         t_activ = gpd.pd.concat([t_activ,res])
     t_activ.set_index('id_zh',inplace=True)
@@ -167,6 +375,7 @@ def to_t_activity(id_zh,actv,con):
     t_activ.drop(['cd_activite_humaine','localisation','impact'],axis=1,inplace=True)
     impact_list.drop(['cd_impact','_cd_impact'],axis=1,inplace=True)
     
+    con = normalize_connexion(con)
     try:
         t_activ.to_sql(
             name='t_activity',
@@ -205,7 +414,7 @@ def check_habitat(habitat,con):
         code=tuple(habitat) if isinstance(habitat,(list,gpd.pd.Series,ndarray)) else f"'{habitat}'"
     )
     with con.begin() as cnx:
-        res = cnx.execute(sql).all()
+        res = cnx.execute(text(sql)).all()
     return [x[0] for x in res if x]
 
 
@@ -218,8 +427,9 @@ def filter_habitat(habitat,con):
     return cd_zh,cd_notzh
 
 
-def check_observ(obs,org,con):
+def check_observ(obs,id_org,con):
     _obs = normalize_observers(obs)
+    con = normalize_connexion(con)
     sql = '''
         SELECT
             r.id_role AS ids_observers,
@@ -227,19 +437,54 @@ def check_observ(obs,org,con):
         FROM utilisateurs.t_roles r
         JOIN utilisateurs.bib_organismes USING (id_organisme)
         WHERE CONCAT(UPPER(r.nom_role), ' ', INITCAP(prenom_role)) {symbol} {code} 
-        AND nom_organisme = '{org}'
+        AND id_organisme = '{org}'
     '''.format(
         symbol='IN' if isinstance(_obs,(list,gpd.pd.Series,ndarray)) else '=',
         code=tuple(_obs) if isinstance(_obs,(list,gpd.pd.Series,ndarray)) else f"'{_obs}'",
-        org=org
+        org=id_org
     )
-    with con.begin() as cnx:
-        res = cnx.execute(sql).all()
-    return [x[0] for x in res if x]
+    res = (gpd.pd.read_sql(
+            sql,
+            con)
+        .merge(_obs.to_frame('observers'),how='right',on='observers'))
+    return res
 
-def insert_observ(obs,org,con):
-    check_observ(obs,org,con)
-    pass
+def insert_observ(obs,id_org,con):
+    check = check_observ(obs,id_org,con)
+    usr_missing = check[check.ids_observers.isnull()].drop_duplicates()
+    if usr_missing.empty:
+        print("Observateurs trouvés dans le schéma `utilisateurs`")
+        return check
+    Q = input("Observateurs `{}` non trouvés dans le schéma `utilisateurs`, voulez-vous les ajouter ? (y/n) ".format(usr_missing.observers.to_list()))
+    if Q.lower() == 'y':
+        id_obs_miss = _insert_observ(usr_missing,id_org,con)
+        for i,row in id_obs_miss.iterrows():
+            check.loc[check.observers==row.observers,'ids_observers'] = row.id_role
+        # check = check_observ(obs,id_org,con)
+        return check.astype({'ids_observers':int})
+    else:
+        return 'No'
+
+def _insert_observ(obs,id_org,con):
+    _obs = gpd.pd.concat(
+        [obs,obs.observers.str.split(' ',n=-1,expand=True)],
+        axis=1,ignore_index=True)
+    _obs['id_org'] = id_org
+
+    sql ='''
+        INSERT INTO utilisateurs.t_roles (nom_role,prenom_role,id_organisme)
+            VALUES {vals}
+        --ON CONFLICT (nom_organisme) DO NOTHING
+        RETURNING id_role, CONCAT(UPPER(nom_role), ' ', INITCAP(prenom_role)) AS observers;
+    '''.format(vals=','.join(["('%s','%s',%i)"%(row[3],row[4],row[5]) for row in _obs.itertuples()]))
+
+    # con = normalize_connexion(con)
+    # res = gpd.pd.read_sql(sql,con)
+    # return res
+    with con.begin() as cnx:
+        _res = cnx.execute(text(sql))
+        res = _res.fetchall()
+    return gpd.pd.DataFrame(res)
 
 def normalize_observers(obs):
     _obs = obs.str.split(' ',expand=True)
@@ -248,15 +493,14 @@ def normalize_observers(obs):
     _obs_stack = _obs.stack().droplevel(-1)
     return _obs_stack.groupby(_obs_stack.index).aggregate(' '.join)
 
-def insert_orga(org,con):
-    pass
+
 def select_orga_user(org,con):
     sql ='''
         SELECT id_organisme FROM utilisateurs.bib_organismes
         WHERE nom_organisme = '{nom}'
     '''.format(nom=org[0])
     with con.begin() as cnx:
-        _res = cnx.execute(sql)
+        _res = cnx.execute(text(sql))
         res = _res.one_or_none()
     return res
 
@@ -274,7 +518,7 @@ def insert_orga_user(org,con):
             RETURNING id_organisme;
         '''.format(nom=org[0])
         with con.begin() as cnx:
-            _res = cnx.execute(sql)
+            _res = cnx.execute(text(sql))
             res = _res.one_or_none()
     else:
         print("Organisme `{}` existant dans le schéma `utilisateurs`".format(org[0]))
@@ -283,10 +527,10 @@ def insert_orga_user(org,con):
 def select_orga_przh(org,con):
     sql ='''
         SELECT id_org FROM pr_zh.bib_organismes
-        WHERE name = '{nom}'
+        WHERE name = '{nom}';
     '''.format(nom=org[0])
     with con.begin() as cnx:
-        _res = cnx.execute(sql)
+        _res = cnx.execute(text(sql))
         res = _res.one_or_none()
     return res
 
@@ -303,19 +547,29 @@ def insert_orga_przh(org,con):
             RETURNING id_org;
         '''.format(nom=org[0],abbrev=f"'{org[1]}'" if org[1] else 'NULL')
         with con.begin() as cnx:
-            _res = cnx.execute(sql)
+            _res = cnx.execute(text(sql))
             res = _res.fetchall()
     else:
         print("Organisme `{}` existant dans le schéma `pr_zh`".format(org[0]))
     return res[0]
 
 def insert_users_missing(user,org,con):
-    id_org = insert_orga_przh(org,con)
+    id_org_przh  = insert_orga_przh(org,con)
     id_user_orga = insert_orga_user(org,con)
-    obsv_missing = insert_observ(user,id_user_orga,con)
+    obsv = insert_observ(user,id_user_orga,con)
+    return obsv, id_org_przh
 
+def filter_zh(code,con):
+    sql ='''
+        SELECT code FROM pr_zh.t_zh
+        WHERE code IN {}
+    '''.format(code)
 
-def insert_zh_fromapi(url,con,dep_filter,orga,prefix_hab_rq=''):
+    con = normalize_connexion(con)
+    res = gpd.pd.read_sql(sql,con)
+    return res
+
+def insert_zh_fromapi(url,con,dep_filter,orga,lst_area=['DEP','COM'],prefix_hab_rq=''):
     """
     Insert data from API into geonature database
 
@@ -335,17 +589,29 @@ def insert_zh_fromapi(url,con,dep_filter,orga,prefix_hab_rq=''):
     None
     """
     api = gpd.read_file(url)
-    df = (api#[api.code_zh.str.startswith(dep_filter)]
+    if api.empty:
+        print("Aucun zone humide trouvée")
+        return None
+    
+    df = (api[api.action=='Créer']
         .rename(columns=dict_columns)
         .rename_geometry('geom')
-        .merge(load_missing_propertie(url,'cd_nomenclature_delimitation',dep_filter),on='code')
+        # .merge(load_missing_propertie(url,'cd_nomenclature_delimitation',dep_filter), on='pk')
+    )
+    df.observateur = normalize_observers(df.observateur)
+    users, id_org  = insert_users_missing(df.observateur,orga,con)
+    df['id_org'] = id_org
+    df = (df
+        .merge(users.drop_duplicates(),how='left',left_on='observateur',right_on='observers')
+        .rename(columns={'ids_observers':'id_role'})
     )
 
-    insert_users_missing(df.observers,orga,con)
 
     df['zh_uuid'] = [uuid4() for _ in range(len(df))]
     df['id_lim_list'] = [uuid4() for _ in range(len(df))]
     df['id_sdage'] = [get_nomenclature_id(con,x,'SDAGE') for x in df.cd_typo_sdage]
+    df['create_author'] = df.id_role.copy()
+    df['update_author'] = df.id_role.copy()
 
     cd_hab = (df
         .set_index('code')
@@ -366,7 +632,7 @@ def insert_zh_fromapi(url,con,dep_filter,orga,prefix_hab_rq=''):
     u = _df[_df.action=="Modifier"].copy()
 
     if not c.empty:
-        id_zh = to_tzh(c,con)
+        id_zh = to_tzh(c,con,lst_area)
         to_cor_zh_cb(id_zh,c,con)
         to_cor_lim_list(c[['id_lim_list','cd_nomenclature_delimitation']],con)
         to_t_activity(id_zh,c[['code','acti_impact']],con)
@@ -398,11 +664,11 @@ def load_missing_propertie(url,propertie,dep_filter='38'):
     features = output['items']['features']
 
     res = {
-        'code':[x['properties']['code_zh'] for x in features if x['properties']['code_zh'].startswith(dep_filter)],
+        'pk':[x['properties']['pk'] for x in features if x['properties']['departement'] == dep_filter],
         propertie:[
             ','.join(x['properties'][propertie]) 
             for x in features 
-            if x['properties']['code_zh'].startswith(dep_filter)],
+            if x['properties']['departement'] == dep_filter],
     }
     return gpd.pd.DataFrame(res)
 
@@ -411,14 +677,14 @@ if __name__ == "__main__":
     from sqlalchemy import create_engine
     from sqlalchemy.engine import URL
     # Parametres bdd 
-    user = ''
-    pwd  = ""
-    adr  = ''
-    base = ''
+    user = 'geonatadmin'
+    pwd  = "prep!!Ge0naT38*aDm1n"
+    adr  = 'localhost'
+    base = 'geonature2db'
     url  = URL.create("postgresql+psycopg2", username=user, password=pwd, host=adr, database=base)
     con_gn  = create_engine(url)
 
-    from pycen import con_gn
+    # from pycen import con_gn
     # Numéro de département permettant d'identifier les zones humides concernées par le territoire
     # ['38', '05'], default : 38
     dep_filter = '38'
@@ -426,6 +692,9 @@ if __name__ == "__main__":
     prefix_hab_rmk = 'Autre(s) habitat(s) décrit(s) :\n'
     # [Nom de l'organisme, Abbreviation]
     organisme = ['Parc national des Écrins','PNE']
+
+    # Liste des type_area à intersecter pour remplir la table cor_zh_area
+    listAreaCover = ['DEP','COM','APB','ZPS','SIC','ZNIEFF1','ZNIEFF2','ENS_ZI']
     
-    api = 'https://geonature.ecrins-parcnational.fr/api/exports/api/21?departement=38'
-    # insert_zh_fromapi(api,con_gn,dep_filter,organisme,prefix_hab_rq=prefix_hab_rmk)
+    api = 'https://geonature.ecrins-parcnational.fr/api/exports/api/21?departement=%s'%dep_filter
+    insert_zh_fromapi(api,con_gn,dep_filter,organisme,lst_area=listAreaCover,prefix_hab_rq=prefix_hab_rmk)

5_GEONATURE/create_listTaxon.py

@@ -79,7 +79,7 @@ else:
 sql = """
 SELECT DISTINCT cd_nom,cd_ref,nom_vern,id_rang FROM {sch}.{tab} 
 WHERE cd_nom IN ('{lst}')
---AND cd_nom NOT IN (SELECT cd_nom FROM {sch}.bib_noms WHERE cd_nom IN ('{lst}'))
+AND cd_nom NOT IN (SELECT cd_nom FROM {sch}.bib_noms WHERE cd_nom IN ('{lst}'))
 """.format(
     sch = schema_geo,
     tab = table_geo,
@@ -98,8 +98,12 @@ df_taxref.drop(columns=['id_rang']).to_sql(
 )
 
 # récupération des IDs la table taxonomie.bib_noms
-# sql = 'SELECT id_nom FROM {sch}.{tab} WHERE id_nom > {id_nom_max}'.format(
-id_liste = 104 # id_liste de la liste présente dans la table taxonomie.bib_listes
+sql = 'SELECT distinct cd_nom FROM {sch}.{tab} WHERE cd_nom IN ({id_nom_max})'.format(
+    sch = schema_geo,
+    tab = 'bib_noms',
+    id_nom_max = ",".join(lst_cdnom))
+
+id_liste = 112 # id_liste de la liste présente dans la table taxonomie.bib_listes
 sql = """
 SELECT id_nom FROM {sch}.{tab} WHERE cd_nom IN ({id_nom_max})
 AND id_nom NOT IN (SELECT id_nom FROM {sch}.cor_nom_liste WHERE id_liste = '{id_liste}')
@@ -109,14 +113,14 @@ AND id_nom NOT IN (SELECT id_nom FROM {sch}.cor_nom_liste WHERE id_liste = '{id_
     id_nom_max = ",".join(lst_cdnom),
     id_liste = id_liste
 )
-df = pd.read_sql_query(sql,con_geo)
-# df = pd.read_sql_table(
+_df = pd.read_sql_query(sql,con_geo)
+# _df = pd.read_sql_table(
 #     table_name='bib_noms',
 #     con= con_geo,
 #     schema=schema_geo
 # )
-df['id_liste'] = id_liste    # id_liste de la liste présente dans la table taxonomie.bib_listes
-df = df[['id_liste','id_nom']]
+_df['id_liste'] = id_liste    # id_liste de la liste présente dans la table taxonomie.bib_listes
+df = _df[['id_liste','id_nom']]
 # envoie de la liste dans la table taxonomie.bib_noms
 df.to_sql(
     name = 'cor_nom_liste',

5_GEONATURE/pivot_bdc_status_v2.py

@@ -217,16 +217,17 @@ if __name__ == "__main__":
     api_taxref = 'https://geonature.cen-isere.fr/taxhub/api/taxref'
 
     # Paramètres de chargement du fichier des taxons
-    PATH = '/home/colas/Documents/tmp/CHARVAS'
-    file = 'liste_sp_CHAR.xlsx'
-    sheet = 'liste_sp'
+    PATH0 = '/media/colas/SRV/FICHIERS'
+    PATH = 'SITES/SITES GERES/PLAN_PLANCHETTES/Scientifique et technique/Flore et habitats/Suivi flore patrimoniale 2025'
+    file = 'donnes_sp_suivi2025.xlsx'
+    sheet = 'liste sp'
 
     # Liste des CD_NOM en entrée
     cd_col = 'cd_ref'   # Nom de la colonne à utiliser dans le feuillet ``sheet``
 
     # Lecture des données
-    taxlist = pd.read_excel(os.path.join(PATH,file),sheet,usecols=[cd_col],header=0)
-    tab_sp = pd.read_excel(os.path.join(PATH,file),sheet,index_col=cd_col)
+    taxlist = pd.read_excel(os.path.join(PATH0,PATH,file),sheet,usecols=[cd_col],header=0)
+    tab_sp = pd.read_excel(os.path.join(PATH0,PATH,file),sheet,index_col=cd_col)
     lst =  taxlist[cd_col]
     
     # Récupération des statuts
@@ -278,7 +279,7 @@ if __name__ == "__main__":
     pivlib = tab_sp.merge(pivlib,on=[cd_col],how='left')
 
     print('INIT writer')
-    NAME_OUT = os.path.join(PATH,sheet+'_status.xlsx')
+    NAME_OUT = os.path.join(PATH0,PATH,sheet+'_status.xlsx')
     with pd.ExcelWriter(NAME_OUT) as writer:
         df.to_excel(
             writer,sheet_name='v_bdc_status',index=False

6_SQL/foreign_table.py

@@ -14,8 +14,8 @@ CREATE SERVER IF NOT EXISTS %s
 '''%(wpr_name,url)
 
 table = '''
-DROP FOREIGN TABLE IF EXISTS %s;
-CREATE FOREIGN TABLE IF NOT EXISTS flux_geo.%s (
+DROP FOREIGN TABLE IF EXISTS {table};
+CREATE FOREIGN TABLE IF NOT EXISTS flux_geo.{table} (
 	id_parcel varchar,
 	surf_parcel float,
 	code_cultu varchar,
@@ -24,9 +24,9 @@ CREATE FOREIGN TABLE IF NOT EXISTS flux_geo.%s (
 	culture_d2 varchar,
 	geom public.geometry(multipolygon, 4326)
 )
-SERVER %s
-OPTIONS (layer '%s');
-'''%(tab_name,tab_name,wpr_name,layer)
+SERVER {srv}
+OPTIONS (layer '{layer}');
+'''.format(table=tab_name,srv=wpr_name,layer=layer)
 
 with con.begin() as cnx:
 	cnx.execute(drop_fgn)
@@ -38,14 +38,16 @@ with con.begin() as cnx:
 
 #######
 #######
-from pycen import con_fon as con
+from pycen import con_anm as con
 from sqlalchemy import text
-db = 'azalee'
+db = 'bd_cen'
 host = '91.134.194.221'
 port = '5432'
-srv_name = 'fdw_azalee'
-tab_name = 'inventaire_zh'
-sch_name = 'inventaires'
+srv_name = 'fdw_bd_cen'
+tab_name = 'communes'
+sch_name = 'territoire'
+view_name = 'v_'+tab_name
+mview_name = 'vm_'+tab_name
 user = 'cen_admin'
 pwd = '#CEN38@venir'
 
@@ -66,56 +68,40 @@ CREATE USER MAPPING IF NOT EXISTS FOR %s
 
 table = '''
 CREATE FOREIGN TABLE IF NOT EXISTS {sch_name}.{tab_name} (
-    site_code varchar(10),
-	nom varchar,
-	auteur_site varchar,
-	auteur_geom varchar,
-	auteur_last_maj varchar,
-	date_site date,
-	date_geom date,
-	date_last_maj date,
-	type_milieu varchar,
-	type_site varchar,
-	typo_sdage varchar,
-	rmq_site text,
-	rmq_fct_majeur text,
-	rmq_interet_patri text,
-	rmq_bilan_menace text,
-	rmq_orient_act text,
-	rmq_usage_process text,
-	code_cb varchar,
-	lib_cb text,
-	activ_hum varchar,
-	impact varchar,
-	"position" varchar,
-	rmq_activ_hum text,
-	connexion varchar,
-	subm_orig varchar,
-	subm_freq varchar,
-	subm_etend varchar,
-	fct_bio varchar,
-	fct_hydro varchar,
-	int_patri varchar,
-	"val_socioEco" varchar,
-	crit_delim varchar,
-	crit_def_esp varchar,
-	entree_eau_reg varchar,
-	entree_eau_perm varchar,
-	entree_eau_topo varchar,
-	sortie_eau_reg varchar,
-	sortie_eau_perm varchar,
-	sortie_eau_topo varchar,
+	code_insee varchar(5),
+	id varchar(24),
+	prec_plani float8,
+	nom varchar(45),
+	statut varchar(20),
+	canton varchar(45),
+	arrondisst varchar(45),
+	depart varchar(30),
+	region varchar(30),
+	popul int4,
+	multican varchar(3),
+	actif bool,
+	epfl varchar(10),
 	geom geometry(geometry,2154)
 )
 	SERVER {fgn_server}
-	OPTIONS (schema_name 'zones_humides', table_name 'v_zoneshumides');
+	OPTIONS (schema_name 'administratif', table_name 'communes');
 '''.format(
 sch_name=sch_name, tab_name=tab_name, fgn_server=srv_name
 )
 
+vm = '''
+CREATE MATERIALIZED VIEW {sch_name}.{mview_name} AS
+SELECT * FROM {sch_name}.{tab_name};
+
+GRANT SELECT ON {sch_name}.{mview_name} TO grp_consult;
+GRANT SELECT ON {sch_name}.{mview_name} TO cen_user;
+'''.format(sch_name=sch_name, mview_name=mview_name, tab_name=tab_name)
 with con.begin() as cnx:
-	cnx.execute(create_ext)
-	cnx.execute(drop_fgn)
-	cnx.execute(fgn_data_wrapper)
-	cnx.execute(fgn_user_wrapper)
-	cnx.execute(text(table))
+	# cnx.execute(create_ext)
+	# cnx.execute(drop_fgn)
+	# cnx.execute(fgn_data_wrapper)
+	# cnx.execute(fgn_user_wrapper)
+	cnx.execute(text(table))
+
+with con.begin() as cnx:
+	cnx.execute(text(vm))

6_SQL/manage_user.py

@@ -54,6 +54,12 @@ def add_limit_user(con,user,date_limit):
         cnx.execute(alter.format(usr=user,date=date_limit))
 
 
+def change_password(con,user,pwd):
+    alter = """ALTER USER "{usr}" WITH PASSWORD '{password}';"""
+    with con.begin() as cnx:
+        cnx.execute(alter.format(usr=user,password=pwd))
+
+
 def create_grp(con,grp):
     sql = """CREATE ROLE {grp} WITH 
         NOSUPERUSER

bdd_ZNIEFF.py

@@ -15,10 +15,7 @@ def znieff(path,code,column='NM_REGZN'):
     
     if isinstance(code,str):
         return df[df[column]==code]
-    elif isinstance(code,pd.Series) or \
-        isinstance(code,list) or \
-        isinstance(code,pd.Index) or \
-        isinstance(code,np.ndarray):
+    elif isinstance(code,(pd.Series,list,pd.Index,np.ndarray)):
         code = list(code) 
         return df[df[column].isin(code)]
     else:
@@ -31,10 +28,7 @@ def source_znieff(path,code,column='NM_SFFZN'):
     
     if isinstance(code,str):
         return df[df[column]==code]
-    elif isinstance(code,pd.Series) or \
-        isinstance(code,list) or \
-        isinstance(code,pd.Index) or \
-        isinstance(code,np.ndarray):
+    elif isinstance(code,(pd.Series,list,pd.Index,np.ndarray)):
         code = list(code) 
         return df[df[column].isin(code)]
     else:
@@ -47,10 +41,7 @@ def source(path,code,column='ID_SOURCE'):
     
     if isinstance(code,str):
         return df[df[column]==code]
-    elif isinstance(code,pd.Series) or \
-        isinstance(code,list) or \
-        isinstance(code,pd.Index) or \
-        isinstance(code,np.ndarray):
+    elif isinstance(code,(pd.Series,list,pd.Index,np.ndarray)):
         code = list(code) 
         return df[df[column].isin(code)]
     else:

edit_qgis.py

@@ -6,7 +6,6 @@ from io import BytesIO
 from os import (walk, path, rename)
 from zipfile import ZipFile, ZIP_DEFLATED
 
-
 def main(in_dir, dic_values, backup_suffix=None,encoding='UTF-8'):
     for (dirpath, dirnames, filenames) in walk(in_dir):
         qgzs = filter(filenames, '*.qgz')
@@ -37,12 +36,12 @@ def main(in_dir, dic_values, backup_suffix=None,encoding='UTF-8'):
 if __name__ == '__main__':
 
     backup_suffix = '.orig'  # Don't overwrite orig .qgz (just in case...), append ".orig"
-    in_dir = r'/home/colas/Documents/tmp/TRAVAUX'
+    in_dir = r'/home/colas/Documents/tmp/MARJORIE'
 
     encodage = 'UTF-8'
     dic_values = {
         '192.168.0.189': '91.134.194.221',
-        'authcfg=1739lo5': 'authcfg=ceniser',
+        'authcfg=xoibz7j': 'authcfg=ceniser',
         'bd_cen38': 'bd-cen-38',
         # 'MS Shell Dlg 2':'Tahoma',
         # 'https://datacarto.datara.gouv.fr':' https://datacarto.open-datara.fr',